Gene SeSA_A4800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4800 
Symbol 
ID6519357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp4661041 
End bp4661985 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content52% 
IMG OID642749732 
Producthypothetical protein 
Protein accessionYP_002117464 
Protein GI194736446 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.329645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.457693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAAGC GCACGTCTCA GAAAGCTTAT GCGTTGCGTC TGGCGGTTGA CGTTTTTATC 
AACAAGAAAT TGATCTTAAC CAACGCCATC ATGCCTGCGC TTCGTGTTAA AAAGGAAGCC 
TCTGTCATAG TGGCGGCGCA TAAAATGTCT TTTCGGACAG GACGAGTCAT GCAAGAAGAG 
CAATCAATTC AACGAGCAGT AACACGGTTA TGTATTCAAT GCGGGCTGTT TTTATTGCAG 
CACGGGGCGG AAAGCGCACT GGTTGATGAG CTTTCCACCC GCCTCGGTTT GGCGCTCGGT 
ATGGATAGCG TCGAAAGCGC GATCTCCTCT AACGCCATTG TCCTGACGAC CATTAAAGAC 
GGACAATGTC TGACATCGAC ACGTAAAAAC CAGGATCGCG GCATTAATAT GCACGTCGTC 
ACGGAGGTTC AGCATATCGT TATCCTCGCG GAACATCGTC TGCTGGATTA CAAAGGCGTG 
GAAAAACGTT TTAGCCAGCT CCGCCCGCTG CGTTATCCGC GCTGGCTGGT GGCGTTTATG 
GTCGGTCTTT CCTGCTCCTG CTTTTGTAAG CTGAATAATG GCGGCTGGGA TGGCGCGGTT 
ATCACCTTTT TCGCCAGTAT GATAGCCATG TATATTCGCC AGATGCTGGC GCAGCGGCAT 
TTACATCCGC AGATCAATTT TTGCATTACC GCCTTTGTCG CTACCACGAT TTCCGGGCTG 
ATGCTCACCC TCCCCGCCTT TAGCCAGACG CCCACTATCG CCATGGCGGC GAGCGTACTG 
CTACTGGTGC CGGGCTTTCC GCTGATTAAT TCCGTCGCAG ATATGTTTAA AGGACATATT 
AATACCGGGC TGGCGCGCTG GGCTATCGCC AGCCTGTTGA CACTGGCCAC CTGTGTGGGC 
GTAGTGATGT CAATGACAGT ATGGGGGCTA CGAGGATGGG TATAA
 
Protein sequence
MTKRTSQKAY ALRLAVDVFI NKKLILTNAI MPALRVKKEA SVIVAAHKMS FRTGRVMQEE 
QSIQRAVTRL CIQCGLFLLQ HGAESALVDE LSTRLGLALG MDSVESAISS NAIVLTTIKD 
GQCLTSTRKN QDRGINMHVV TEVQHIVILA EHRLLDYKGV EKRFSQLRPL RYPRWLVAFM 
VGLSCSCFCK LNNGGWDGAV ITFFASMIAM YIRQMLAQRH LHPQINFCIT AFVATTISGL 
MLTLPAFSQT PTIAMAASVL LLVPGFPLIN SVADMFKGHI NTGLARWAIA SLLTLATCVG 
VVMSMTVWGL RGWV