| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4705 |
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| Symbol | treC |
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| ID | 6519219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 4571114 |
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| End bp | 4572766 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642749641 |
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| Product | trehalose-6-phosphate hydrolase |
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| Protein accession | YP_002117374 |
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| Protein GI | 194737289 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02403] alpha,alpha-phosphotrehalase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0221451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTC CCCTCTGGTG GCAAAACGGC GTTATTTATC AGATCTACCC AAAAAGTTTT
CAGGACACGA CCGGCAGCGG CACCGGCGAT TTACGCGGCG TCACGCAGCA CCTTGACTAT
CTACAGCGAC TCGGCGTGGA TGCCATCTGG CTCACGCCGT TTTATATCTC GCCGCAGGTG
GATAACGGTT ATGACGTCGC AAATTATACG GCCATCGACC CGACCTACGG CACGCTGGAT
GATTTTGACG AGCTGGTCGC GCAGGCGAAA GCACGCGGTA TTCGCATCAT CCTGGATATG
GTGTTTAACC ATACTTCTAC CCAGCACGCC TGGTTTCGCG AAGCGCTGAA CAAAGAGAGT
CCATACCGTC AGTTTTATAT CTGGCGCGAT GGCACGCCGG ATGTCTGCCC GAATAACTGG
CAATCCAAAT TTGGCGGCAG CGCCTGGCGC TGGCATAGCC AGAGCGAACA ATATTATTTA
CACCTTTTCG CGCCTGAACA GGCCGACCTG AACTGGGAAA ACCCCGCCGT GCGCGCCGAG
CTGAAAAAGG TCTGCGAATT CTGGGCCGAT CGCGGCGTGG ATGGCCTGCG TCTGGACGTG
GTGAACCTGA TCGCCAAAGA TCAGGATTTT CCTGACGATC CGACGGGCGA CGGACGCCGC
TTTTATACCG ACGGACCGCG CGCGCATACG TTTTTACGCG AAATGAACCG TGACGTTTTT
ACGCCGCGTA ATCTGATGAC GGTAGGCGAA ATGTCCTCTA CCACGCTGGA AAACTGCCAG
CAATATGCCG CGCTTAGCGG CGACGAACTC TCGATGACCT TCAATTTTCA TCATCTGAAG
GTGGATTACC CCAATGGCGA AAAGTGGACG CTGGCAAAAC CTGATTATGT GGCGCTGAAA
GCGTTGTTCC GCCACTGGCA ACAGGGGATG CATAACGTCG CCTGGAACGC GTTATTCTGG
TGTAATCACG ATCAGCCGCG CATCGTTTCC CGCTTTGGCG ACGAGGGTGA ATACCGGGTT
CCAGCCGCGA AAATGTTGGC GATGGCGCTG CACGGTATGC AAGGGACGCC TTATATCTAT
CAGGGCGAAG AAATCGGCAT GACCAACCCA CACTTTACCC GCATCACCGA TTATCGCGAC
GTGGAAAGCC ATAACATGTT TGCCGCGCTA CGCGCCGCCG GACGCGACCC CGACGAACTA
CTGGCTATCC TGGCCAGTAA ATCCCGCGAC AACAGCCGCA CGCCGATGCA GTGGAACCAC
GGTAAAAACG CCGGTTTCAC CCAGGGCGAG CCGTGGATAA GCCTGTGCGA TAACTATACG
GAGGTTAATG TCGCGGCGGC ATTACGCGAT GAAAACTCGG TGTTTTACAC CTATCAAAAG
CTGATTGCGC TACGTAAAAC CCAGCCTGTA CTGATCTGGG GCGATTATCA GGATCTCCTC
CCGGATAGCC CATCAGTATG GTGTTATCGT CGCCAGTGGC AGGGGCAAAC CCTGCTGGTT
GTCGCCAATC TGAGCGACCA GTGTCAGGAG TGGCATCCAC CGCATATCAA AGGACAGTGG
CAGGCGCTAC TGCACAATTA TGGCGAGGTC GCCAGCCAGC CAGCCGCGAT GACGCTCCGC
CCATTTGAAG CCATCTGGTG GTTACAACGC TAA
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| Protein sequence | MTIPLWWQNG VIYQIYPKSF QDTTGSGTGD LRGVTQHLDY LQRLGVDAIW LTPFYISPQV
DNGYDVANYT AIDPTYGTLD DFDELVAQAK ARGIRIILDM VFNHTSTQHA WFREALNKES
PYRQFYIWRD GTPDVCPNNW QSKFGGSAWR WHSQSEQYYL HLFAPEQADL NWENPAVRAE
LKKVCEFWAD RGVDGLRLDV VNLIAKDQDF PDDPTGDGRR FYTDGPRAHT FLREMNRDVF
TPRNLMTVGE MSSTTLENCQ QYAALSGDEL SMTFNFHHLK VDYPNGEKWT LAKPDYVALK
ALFRHWQQGM HNVAWNALFW CNHDQPRIVS RFGDEGEYRV PAAKMLAMAL HGMQGTPYIY
QGEEIGMTNP HFTRITDYRD VESHNMFAAL RAAGRDPDEL LAILASKSRD NSRTPMQWNH
GKNAGFTQGE PWISLCDNYT EVNVAAALRD ENSVFYTYQK LIALRKTQPV LIWGDYQDLL
PDSPSVWCYR RQWQGQTLLV VANLSDQCQE WHPPHIKGQW QALLHNYGEV ASQPAAMTLR
PFEAIWWLQR
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