Gene SeSA_A4678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4678 
Symbol 
ID6516960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4544998 
End bp4546731 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content53% 
IMG OID642749616 
Productouter membrane protein, OMP85 family 
Protein accessionYP_002117349 
Protein GI194736090 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0729] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACATA TCCGTCAGTT ATGTTGGGTT AGCTTACTGT GCCTGAGCAG TTCTGCGGTA 
GCCGCAAATG TTCGTCTGAA AGTCGAAGGG CTATCCGGAG AACTGGAAAA AAACGTTCGC
GCACAGCTCT CTACGATTCA GAGCGATGAG GTGACGCCGG ATCGGCGCTT TCGCGCCCGA
GTTGATGATG CGATTCGCGA AGGGCTTAAA GCGTTAGGCT ATTACGAACC CACTATCAAA
TTCGACTTGC TTCCACCGCC TGCGAAAGGA CGGCAGATAT TAATCGCCAG GGTTACGCCC
GGCCAGCCGG TGTTGATTGG CGGTACAGAA GTCATTTTAC GCGGCGGCGC GCGCACGGAC
AAAGATTATC TGGCCTTACT GAAAACGCGT CCGGCAATCG GCACGGTGCT GAACCAGGGA
GACTATGACA ATTTTAAAAA GTCGTTAACC AGCGTGTCGC TACGTAAAGG CTATTTCGAC
AGCGAATTCG TTAAAAGTCA GTTGGGAATT GCTCTGGGCC GTCATCAGGC GTTTTGGGAT
ATTGATTATG ATAGCGGTGA GCGCTATCGC TTCGGGCCTG TCACCTTCGA AGGTTCGCAG
ATTCGTGATG AATATTTACA AAATCTGTTG CCGTTTAAAG AGGGCGATGA GTACGAGTCG
AAAGATTTGG CGGAACTAAA CCGCCGACTT TCCGCTACCG GATGGTTTAA TTCTGTCGTG
GTGGCGCCGG AATTTGAGAA ATCGCGTAAA ACAAAAATTC TGCCGTTAAA AGGCGTGGTA
TCGCCGCGAA CCGAAAACAC GATTGAAACT GGGGTGGGGT ACTCCACCGA CGTCGGGCCG
CGCGTGAAAG CGTCGTGGAA AAAACCGTGG ATGAACTCCT ACGGTCATAG CCTGACCACC
AGCACCAGTA TTTCTGCGCC GGAACAGGTG CTGGATTTTA GTTATAAAAT GCCGCTGCTG
AAAAACCCGC TGGAGCAATA CTATCTGGTA CAGGGCGGTT TTAAACGTAC CGATTTGAAT
GATACGGAGC AGGACTCGAC CACGCTTGCC GTGTCGCGTT ACTGGGACCT TTCCAGCGGT
TGGCAGCGGG CGATTAACCT GCGCTGGAGT TTCGACCACT TTACCCAGGG GAACGTCACC
AATACCACCA TGCTGTTCTA CCCGGGCGTG ATGATCAGCC GAACCCGCTC GCGAGGGGGA
CTGATGCCAA CCTGGGGCGA TTCGCAGCGC TATTCAGTAG ACTATTCGAA TACGGCCTGG
GGCTCCGACG TGGATTTCTC CGTACTGCAG GCGCAAAACG TCTGGATTCG GACTTTGTAC
GATCGCCACC GTTTTGTGAT GCGCGCCAAT TTGGGCTGGA TAGAAACCGG TGATTTCGAC
AAAGTTCCGC CGGATTTACG TTTCTTCGCC GGGGGCGACC GCAGTATTCG CGGCTATAAA
TACAAATCTA TTTCGCCTAA AGATAGCGAC GGCAATCTTA AAGGCGCCTC AAAACTGGCA
ACCGGATCGC TGGAGTACCA GTATAACGTC ACCGGCAAAT GGTGGGGGGC GGTGTTTGTC
GATAGCGGCG AGGCGGTGAG TGATATTCGC CGCAGCGATT TCAAAACCGG GACCGGGGTC
GGCGTGCGCT GGGCGTCGCC GGTTGGGCCT GTCAAACTCG ATTTTGCCGT ACCGGTCGGC
GACAAAGACG AACACGGTTT ACAGTTTTAT ATCGGTCTGG GGCCTGAATT ATGA
 
Protein sequence
MPHIRQLCWV SLLCLSSSAV AANVRLKVEG LSGELEKNVR AQLSTIQSDE VTPDRRFRAR 
VDDAIREGLK ALGYYEPTIK FDLLPPPAKG RQILIARVTP GQPVLIGGTE VILRGGARTD
KDYLALLKTR PAIGTVLNQG DYDNFKKSLT SVSLRKGYFD SEFVKSQLGI ALGRHQAFWD
IDYDSGERYR FGPVTFEGSQ IRDEYLQNLL PFKEGDEYES KDLAELNRRL SATGWFNSVV
VAPEFEKSRK TKILPLKGVV SPRTENTIET GVGYSTDVGP RVKASWKKPW MNSYGHSLTT
STSISAPEQV LDFSYKMPLL KNPLEQYYLV QGGFKRTDLN DTEQDSTTLA VSRYWDLSSG
WQRAINLRWS FDHFTQGNVT NTTMLFYPGV MISRTRSRGG LMPTWGDSQR YSVDYSNTAW
GSDVDFSVLQ AQNVWIRTLY DRHRFVMRAN LGWIETGDFD KVPPDLRFFA GGDRSIRGYK
YKSISPKDSD GNLKGASKLA TGSLEYQYNV TGKWWGAVFV DSGEAVSDIR RSDFKTGTGV
GVRWASPVGP VKLDFAVPVG DKDEHGLQFY IGLGPEL