Gene SeSA_A4632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4632 
SymbolhflC 
ID6516885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4506995 
End bp4507999 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content54% 
IMG OID642749572 
ProductFtsH protease regulator HflC 
Protein accessionYP_002117305 
Protein GI194736576 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGT CAGTTATTGC GATTATCATC ATCGTGCTGG TAGTGCTCTA CATGTCCGTC 
TTTGTGGTCA AAGAGGGCGA GCGTGGCATT ACGCTGCGTT TTGGTAAAGT TCTGCGTGAC
GATGAGAACA AACCGCTGGT TTACGCGCCG GGTCTGCACT TTAAGATCCC GTTTATTGAA
TCAGTGAAAA TGCTTGATGC GCGTATCCAG ACGATGGATA ACCAGGCCGA TCGCTTTGTG
ACTAAAGAGA AGAAAGACCT GATTGTCGAC TCCTACATCA AATGGCGTAT CAGCGACTTT
AGCCGTTACT ATCTGGCGAC CGGCGGCGGC GATATTTCGC AAGCCGAAGT GCTGTTAAAA
CGTAAATTCT CGGACCGTTT GCGTTCTGAG ATTGGTCGCC TGGACGTAAA AGACATCGTG
ACCGATTCTC GTGGTCGTCT GACTCTGGAA GTGCGCGACG CGCTGAACTC CGGTTCAGCC
GGTACCGATG ATGAAGTGGC GACCCCGGCG GCGGATGACG CGATTGCCGA AGCGGCGGAA
CGCGTCACGG CGGAAACCAA AGGTAAAGTA CCGGTCATCA ACCCGAACAG TATGGCGGCG
TTGGGTATCG AAGTGGTCGA TGTGCGTATT AAGCAGATCA ACCTGCCGAC CGAGGTTTCT
GAGGCGATTT ACAACCGTAT GCGCGCCGAG CGTGAAGCGG TCGCGCGTCG TCATCGTTCA
CAAGGTCAGG AAGAAGCGGA AAAACTGCGT GCGGCTGCTG ACTATGAGGT GACGAAAACT
CTGGCGGAAG CCGAGCGTCA GGGACGTATC ATGCGTGGTG AAGGTGATGC TGAAGCCGCG
AAGCTGTTTG CCGATGCGTT CAGCCAGGAC CCTGATTTCT ACGCGTTCAT TCGTAGTCTG
CGCGCTTACG AGAAGAGCTT CGAAGGTAAT CAGGACGTGA TGGTACTGAG CCCGGACAGC
GATTTCTTCC GCTACATGAA GACACCGAGT TCGACGACAC GTTAA
 
Protein sequence
MRKSVIAIII IVLVVLYMSV FVVKEGERGI TLRFGKVLRD DENKPLVYAP GLHFKIPFIE 
SVKMLDARIQ TMDNQADRFV TKEKKDLIVD SYIKWRISDF SRYYLATGGG DISQAEVLLK
RKFSDRLRSE IGRLDVKDIV TDSRGRLTLE VRDALNSGSA GTDDEVATPA ADDAIAEAAE
RVTAETKGKV PVINPNSMAA LGIEVVDVRI KQINLPTEVS EAIYNRMRAE REAVARRHRS
QGQEEAEKLR AAADYEVTKT LAEAERQGRI MRGEGDAEAA KLFADAFSQD PDFYAFIRSL
RAYEKSFEGN QDVMVLSPDS DFFRYMKTPS STTR