Gene SeSA_A4570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4570 
Symbol 
ID6518868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp4450792 
End bp4451667 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content35% 
IMG OID642749512 
ProductAraC family regulatory protein 
Protein accessionYP_002117248 
Protein GI194737340 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.132116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.374836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAG TATTTAATCC CTCACCTGTC CAGGTGGGGA GCATTGAATG TTTACAATCA 
GCGCAAAACT GGCAGAGGAA ATCCTTATCA CTTCAGGGAT TAAATTTACT GCAGTCCGTG 
CTCATCAAGC TCACCACGGG TAAAATTTCA ATTACGACAT CGTCCGGGGA GTATATTACG 
GCATCAGGGC CAATGTTAAT ATTTTTAGCT AAAGATCAAA CCATTCATAT AACAATGGAA 
GAGACTCATG AACAGTTAAA TTATAATTTA ATTGAATTAG ATTCAGCGTC AATAAAAAAT 
GCTTATAATT TTTTTCTGTA TGAACATGCA GACTTTTCGG CCCCATTAAC AAAACCGACG 
ACAAAACATC TGTTAGCGCC AATAGAAACA GGCGTAGCAA GAGTATTCAA CCTCTTACAC 
TCTTCAAATA AAAGCCAAAA ACTATCCCAA GATAAAAAGG AATATTTAAT AAGATTTCTA 
CTTTCAGAGT TCATCTATGA ACCCGAAGCA TTTGCTCTCT TCAGAGAACT ATCGCAAAAT 
ACATTAGCCG AAAACATTTA TAATATTATT ATAAGCGACA TAAGTCGAAA ATGGGCGCTC 
AAGGATATTT CTGACTCACT CTATATGAGT TGTTCCACAT TAAAGAGGAA ATTGAAACAA 
GAGAACACCT CATTCAGCGA AGTTTACCTT AATGCGCGAA TGAATAAAGC GACAAAACTT 
CTACGCAATA GTGAATATAA TATTACCCGA GTGGCTTATA TGTGTGGTTA TGATAGTGCT 
TCTTATTTTA CATGCGTTTT TAAAAAACAC TTCAAAACTA CACCATCGGA ATTTTTAGCG 
TTTTTATCTT CCTCTCGTCA TCAATATGTT AATTGA
 
Protein sequence
MLKVFNPSPV QVGSIECLQS AQNWQRKSLS LQGLNLLQSV LIKLTTGKIS ITTSSGEYIT 
ASGPMLIFLA KDQTIHITME ETHEQLNYNL IELDSASIKN AYNFFLYEHA DFSAPLTKPT 
TKHLLAPIET GVARVFNLLH SSNKSQKLSQ DKKEYLIRFL LSEFIYEPEA FALFRELSQN 
TLAENIYNII ISDISRKWAL KDISDSLYMS CSTLKRKLKQ ENTSFSEVYL NARMNKATKL 
LRNSEYNITR VAYMCGYDSA SYFTCVFKKH FKTTPSEFLA FLSSSRHQYV N