Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4559 |
Symbol | |
ID | 6518653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 4440472 |
End bp | 4442103 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642749503 |
Product | sensory histidine kinase DcuS |
Protein accession | YP_002117239 |
Protein GI | 194734757 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACT CCCTGCCATG CCGGGCGTTA CGCAAACGCC CCATGAAACT CGGCACTACC GTCATTCTGA TGGTCAGCGC CGTTTTGTTT TCGGTGCTCG TTGTGGTCCA TCTGATCTAT TTTTCGCAAA TCAGCAGCAT GACGCGCGAC GCGCTGGCAG ATAAAGCGCT GGCGGTGGCG CGCTCGCTGG CGGACTCTCC GGCAATTCGC GAGGGGCTGA AAAAACCGCC TGCGGAAAGC GGCATTCAGA CGCTCGCCGA AGCGGTGAGC CAGCATAATG GCTTTTTGTT TATTGTGGTG ACCAACATGC AGGGCATCCG TTATTCACAC CCAGAAACGC AGCGAATCGG CCAACCGTTC AAAGGCGATG ACATTCTGCT CGCGCTGCAG GGAAAGGAAA ACGTTGCCAT TAATCGCGGC TTTCTTGCCA AAGCGCTGCG CGTTTTCACA CCGGTTTATG ATGAACGCCA CCGGCAGATC GGTGTGGTAG CGATCGGCCT GGAACTCAGT CACGTTACGC AGCAGATCAA CAATAGCCGC GGCAGTATTA TCTGGTCCAT TCTGTTCGGC GCTCTGGTGG GGTTATTAGG CACGTATGCG CTGGTCAAGG TGCTAAAACG TATCCTGTTT GGCCTCGAAC CCTATGAGAT CTCAACCCTG TTTGAACAAC GCCAGGCGAT GCTGCAGTCA ATCAAAGAGG GCGTTATCGC CGTGGATGAT AGCGGCGAAG TCACGTTGAT TAACCATGCG GCGCAGACGC TGCTCGATTA TCGAAAAACG CAGGATGACG CCAGATTATC CACCCTGAGT CATGCCTGGT CGCAGGTGGT GGACATTAGC GAAGTGTTGC GTGACGGTAC GCCGCGCCGC GATGAAGAGA TTATCGTCAA AGGCCGCCTG CTGCTGGTGA ATACCGTTCC GGTGCGCAGC AACGGCGAAA TTATCGGCGC GATATCCACC TTCAGGGATA AAACAGAAGT TCGCCAACTG ATGCAGCGGT TGGACGGGAT GGTGAACTAC GCGGATGCGC TCCGTGAACG ATCCCACGAA TTCATGAACA AATTACATGT GATTCTGGGA TTATTGCACC TGAAGAGTTA TAAGCAGCTT GAAGCGTATA TTATCAAGAC GGCCAATAAC TATCAGGAAG AGATCGGTTT GCTGCTGGGT AAAATAAAGT CGCCGATTAT CGCTGGCTTT TTGCTCAGTA AAATTACTCG CGCCTCTGAT TTCGGGCACA GCCTGGTGAT AAGCAGCGAC AGCCAGTTAC CGGATAATAA CAATGAAGAT CAGGTTACGG TGCTGATTAC GGCGCTGGGT AATTTGATTG AAAACGCGCT GGAAGCATTG AGCCAGGAAT CCGGCGGCGA AATCAGCGTC TCGTTACACT ACCGCCATGG CTGGCTGCAT TGCGAAGTGA GCGATGACGG TCCGGGTATC GAACCTGAGC GCATCGAGGC GATTTTTGAA AAAGGCGTCT CGTCGAAAGG CGCCGAACGC GGCGTCGGTT TAGCGCTGGT TAAACAGCAG GTTGAAGCGC TTGGCGGCGT AATTTCCGTG GAGTCCGAGC CTGGGATCTT CACACAATTT TTTGTACAGT TACCCTGGGA TGGAAAAAGG ACCAGCCTAT GA
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Protein sequence | MKHSLPCRAL RKRPMKLGTT VILMVSAVLF SVLVVVHLIY FSQISSMTRD ALADKALAVA RSLADSPAIR EGLKKPPAES GIQTLAEAVS QHNGFLFIVV TNMQGIRYSH PETQRIGQPF KGDDILLALQ GKENVAINRG FLAKALRVFT PVYDERHRQI GVVAIGLELS HVTQQINNSR GSIIWSILFG ALVGLLGTYA LVKVLKRILF GLEPYEISTL FEQRQAMLQS IKEGVIAVDD SGEVTLINHA AQTLLDYRKT QDDARLSTLS HAWSQVVDIS EVLRDGTPRR DEEIIVKGRL LLVNTVPVRS NGEIIGAIST FRDKTEVRQL MQRLDGMVNY ADALRERSHE FMNKLHVILG LLHLKSYKQL EAYIIKTANN YQEEIGLLLG KIKSPIIAGF LLSKITRASD FGHSLVISSD SQLPDNNNED QVTVLITALG NLIENALEAL SQESGGEISV SLHYRHGWLH CEVSDDGPGI EPERIEAIFE KGVSSKGAER GVGLALVKQQ VEALGGVISV ESEPGIFTQF FVQLPWDGKR TSL
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