Gene SeSA_A4538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4538 
Symbol 
ID6516031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp4415055 
End bp4415744 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content53% 
IMG OID642749484 
Producttetratricopeptide repeat protein 
Protein accessionYP_002117220 
Protein GI194734116 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.429875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAC TTCTTGCATT GATGTTGTTT ATGACATTCT TTGCCCATGC CGCAGATCCT 
GAGCCGGGTA GCCAGTATTT GCAGGCAGCA GAGGCAGGTG ACAGACGCGC GCAATATTTT 
CTGGCCGACA GTTGGTTGAG CTATGGCGAT TTGAACAAAG CTGAATACTG GGCGCAAAAA 
GCCGCCGACA ATGGCGACGC CGACGCCTGC GCGCTACTGG CGCAAATCAA AATCACTAAT 
CCGGTAAGCC TGGATTATCC CGACGCGAAA AAGCTGGCTG AAAAGGCGGC TAACGCGGGC 
AGTAAAGCGG GCGAAATTAC GCTGGCGCGG ATCCTGGTCA ACACCCAGGC CGGGCGTCCG 
GACTACCCAA AAGCCATCTC GCTGCTGCAA AAGGCCTCTG AAGATCTGGA TAACGACTCC 
GCGGTGGATG CGCAAATGTT GCTTGGCCTG ATTTACGCCA ACGGCGTGGG CATTGCCGCC 
GATGATGAAA AAGCCGCCTG GTATTTCAAA CGCAGTTCCG CCATTTCCCG TACCGGCTAT 
TCAGAATACT GGGCGGGAAT GATGTTTTTA AACGGTGAAC CGGGCTTTAT TGAAAAGAAC 
AAGCAGAAGG CGTTGCACTG GTTGAATCTA AGCTGTCTGG AAGGGTTTGA TACCGGTTGC 
GAAGAGTTCG AAACGCTAAC AAATGGCTGA
 
Protein sequence
MKPLLALMLF MTFFAHAADP EPGSQYLQAA EAGDRRAQYF LADSWLSYGD LNKAEYWAQK 
AADNGDADAC ALLAQIKITN PVSLDYPDAK KLAEKAANAG SKAGEITLAR ILVNTQAGRP 
DYPKAISLLQ KASEDLDNDS AVDAQMLLGL IYANGVGIAA DDEKAAWYFK RSSAISRTGY 
SEYWAGMMFL NGEPGFIEKN KQKALHWLNL SCLEGFDTGC EEFETLTNG