| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4533 |
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| Symbol | ccmF |
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| ID | 6516559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 4410387 |
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| End bp | 4412123 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642749479 |
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| Product | heme lyase subunit NrfE |
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| Protein accession | YP_002117215 |
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| Protein GI | 194735440 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATAATC TGGACATCTT CCTTCCTGAA GCCGGATTTC TGGCGCTGTT GTTGAGTCTC
GGGGTCAACG TGTTGACCCC GCTGGCGACG TGGTGCGGGA TGGGGCAGCA CTGGCGTGGC
GTCATGCGCC TGACGACCTG CGGCGCGTGG ACGGCGTTCA CGCTGCTGCT ACTGGCGTTT
GCGATTCTGG TTAGCTGTTT TCTGACCAGC GATTTTTCGG TCGTTTATGT TGCGCAGCAT
AGCCATAGTC AGTTGTCATG GGGACTGAAA CTGGCGGCGG TATGGGGCGG TCATGAAGGC
TCGCTCCTGC TGTGGGCGCT GCTTCTTTCG GGGTGGACGG CGCTATTCGC CTGGCGCTCC
CGGCATGAAT CTGACGCGCT TTTTCCGCTG ACCCTGAGCA TCTTGTCCCT CATTATGGCC
TCGCTGCTGC TATTTATTGT GCTGTGGTCC GATCCGTTCC TGCGTATTTT CCCTCCCGCC
ATGGAAGGGC GCGACCTTAA TCCCATGCTG CAACATCTGG GGCTGATCTT ACATCCGCCT
CTGCTCTATC TGGGTTATGG CGGCCTGATG ACCGCGGCGA GCGTAGCGCT GGCTTCGCTA
CTGTGCGGCG GCTTTAACGC GGCAACCGCC TGGGTGTGCT GGCGCTGGGC GTTACCCGGC
TGGTGCGCTC TGACGCTGGG GATCATTCTC GGATCGTGGT GGGCGTATTG CGAACTGGGC
TGGGGCGGCT GGTGGTTCTG GGACCCGGTG GAAAATGCCT CGTTGTTGCC GTGGCTTGCC
GCCAGCGCCT TGCTGCACAG TCTGTATGTC AGCCGCCAGC GCGGGAGCTT CCGTCACTGG
TCGTTGCTGC TGGCGATACT GACGCTGATC CTCTCGTTGC TGGGAACGCT GATTGTGCGT
TCCGGCATTC TTGTTTCGGT ACATGCCTTT GCGCTGGATA ACGTGCGCGC GGTGCCGCTG
TTTACCCTTT TTGCCGCGTT AAGTCTGGCA TCGCTTGCTC TGTACGGCTG GCGGGCGCGG
GAGCCGTATC CGGCGACGCG TTTGGACGGC GGAAAGTGCG AAACGCTCAT TCTGGCGACG
TTGCTGCTCT TTAGCGCCGT CTTGTTGATC GTGCTGGTCG GGACGCTCTA CCCCATGATT
TATGGTTTGA TGGGCTGGGG AAGGCTTTCG GTGGGCGCGC CCTATTTTAA TCGCGTCACG
CTGCCGTTTG GTCTGCTGAT GCTGGTGGTT ATCGTACTGG CGACAATCAG AAGCCGCAAA
GTCTCTGTGC ATCGTCAGCT TCCGGCATTG CTGGCGCATA CGGGCGTATT TATCTTCGCC
GCCGGGATCA TGGTTTCCAG CGGTAGTCGG CATGAAATCA GCCTTAACCT CAGCCCCAGT
CAGCAGGTAG TACTGGCGGG CTATACCTTT CGTTTCGAGC GTCTGGATCT GGAGGCCAAA
GGCAACTACA CCAGTGAAAA AGCGCGGATC ACGTTGTGGC GGAATGAAAA ACGCATTGGC
AGCCTGCAGC CTGAAAGGCG CTTCTATGCC GCGCGTCGTC AACAGATGAT GGAGCCGGGG
ATTCACTGGA ACCTGCTACA TGACTGGTAC GCGGTGATGG GCGAAAAAAC CGGACCGGAT
CGTTACGCCA TGCGCTTATA CGTGCAGACC GGCGTGCGCT GGATCTGGGG TGGGGGATTG
TTGATGGTGT GTGGCGCGCT GCTGAGCGGA TGGCGGGGGA GGAAGCGTGA TGCGTAA
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| Protein sequence | MHNLDIFLPE AGFLALLLSL GVNVLTPLAT WCGMGQHWRG VMRLTTCGAW TAFTLLLLAF
AILVSCFLTS DFSVVYVAQH SHSQLSWGLK LAAVWGGHEG SLLLWALLLS GWTALFAWRS
RHESDALFPL TLSILSLIMA SLLLFIVLWS DPFLRIFPPA MEGRDLNPML QHLGLILHPP
LLYLGYGGLM TAASVALASL LCGGFNAATA WVCWRWALPG WCALTLGIIL GSWWAYCELG
WGGWWFWDPV ENASLLPWLA ASALLHSLYV SRQRGSFRHW SLLLAILTLI LSLLGTLIVR
SGILVSVHAF ALDNVRAVPL FTLFAALSLA SLALYGWRAR EPYPATRLDG GKCETLILAT
LLLFSAVLLI VLVGTLYPMI YGLMGWGRLS VGAPYFNRVT LPFGLLMLVV IVLATIRSRK
VSVHRQLPAL LAHTGVFIFA AGIMVSSGSR HEISLNLSPS QQVVLAGYTF RFERLDLEAK
GNYTSEKARI TLWRNEKRIG SLQPERRFYA ARRQQMMEPG IHWNLLHDWY AVMGEKTGPD
RYAMRLYVQT GVRWIWGGGL LMVCGALLSG WRGRKRDA
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