Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4532 |
Symbol | nrfD |
ID | 6515746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 4409438 |
End bp | 4410394 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642749478 |
Product | cytochrome c nitrite reductase, NrfD subunit |
Protein accession | YP_002117214 |
Protein GI | 194735175 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCCG CTTCTGCATT TCATTTTGCA TCACTGGTGT GGGACTGGCC CATCGCCATC TATCTGTTCC TGATTGGCAT CTCTGCCGGA CTGGTTACGT TGGCGATTCT GCTGCGCCGC TTCCATCCTG AGGCGGGCGG TTCGGACAGC ACGCTGCTGC GCACCACGCT GGTGTTAGGG CCGGGGGCGA TTATTCTTGG TCTGCTGATT CTGGTCTTTC ACCTGACGCG CCCGTGGACC TTCTGGAAGC TGATGTTCCA CTACAGCTTT ACCTCGGTGA TGTCGATGGG GGTGATGCTG TTCCAGTTGT ACATGGTAGT GCTGGTGCTG TGGCTGGCGA AAATCTTTGA AAAAGAGGTG ATTGCCCTGC AGCAGCGTTG GCTGCCGCGG TTAGAGATCG TGCAGAAAGT GTTGGCGCTA ATAACGCCGT TTCATCGCGC GCTGGAGACG TTAATGCTGG TGCTGGCGGT CCTGCTCGGG GCGTACACCG GCTTTCTGCT GTCGGCGCTG AAATCCTATC CGTTCCTGAA TAACCCGATC CTGCCGGTGC TGTTCCTGTT CTCCGGCATC TCCTCCGGCG CGGCGGTGGC GCTGATCGCT ATGGCGTTAC GCCATCGTAG CAACCCGCAC AGCACCGAGG CGCGCTTTGT GCATCGCATG GAGGTTCCGG TGGTATGGCT GGAAATTTTC CTGCTGGCGG CGTTCTTCGT CGGTCTGGCG CTGGGCGATG ACGGCAAAAT GCGCGCGCTG GCGGCGGCGC TGGGCGGCGG ATTCTGGAGC TGGTGGTTCT GGCTTGGCGT CGTAGGGCTG GGATTGATTA TCCCGCTGCT GCTGAAACCC TGGGCAAATC GTAGCGTCAC GTTTCACGGC GTGCTGGCCG TTTGCGGCGC CAGTTTGACC GGCGTGCTGC TGCTGCGCTT TTTCATTCTT TATGCGGGAC AGCTAACGGT TGCATAA
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Protein sequence | MTPASAFHFA SLVWDWPIAI YLFLIGISAG LVTLAILLRR FHPEAGGSDS TLLRTTLVLG PGAIILGLLI LVFHLTRPWT FWKLMFHYSF TSVMSMGVML FQLYMVVLVL WLAKIFEKEV IALQQRWLPR LEIVQKVLAL ITPFHRALET LMLVLAVLLG AYTGFLLSAL KSYPFLNNPI LPVLFLFSGI SSGAAVALIA MALRHRSNPH STEARFVHRM EVPVVWLEIF LLAAFFVGLA LGDDGKMRAL AAALGGGFWS WWFWLGVVGL GLIIPLLLKP WANRSVTFHG VLAVCGASLT GVLLLRFFIL YAGQLTVA
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