| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4526 |
|---|
| Symbol | actP |
|---|
| ID | 6519282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 4402069 |
|---|
| End bp | 4403718 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642749472 |
|---|
| Product | acetate permease |
|---|
| Protein accession | YP_002117208 |
|---|
| Protein GI | 194735959 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02711] cation/acetate symporter ActP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGAG TTCTGACGGC GCTTGCCGCC GCACTCCCCT TCGCCGCTCA TGCGGCGGAT
GCCATTAGCG GCGCGGTTGA ACGCCAGCCC ACCAACTGGC AGGCGATTAT CATGTTTTTG
ATTTTCGTCG TGTTTACGCT CGGTATTACC TACTGGGCCT CTAAACGCGT ACGTTCCCGT
AGCGACTACT ACACCGCTGG CGGCAATATC ACCGGGTTCC AGAACGGCCT GGCGATTGCC
GGCGACTATA TGTCCGCCGC GTCATTTCTC GGCATTTCCG CTCTGGTGTT TACCTCCGGT
TATGACGGGT TGATCTATTC GCTGGGCTTC CTTGTCGGCT GGCCAATCAT CCTGTTTTTG
ATTGCCGAGC GCCTGCGTAA TCTGGGACGT TATACTTTTG CTGACGTTGC CTCTTATCGC
CTGAAACAGG GGCCAATCCG TATTCTTTCG GCCTGTGGCT CCCTGGTAGT GGTGGCGCTT
TATCTCATCG CCCAAATGGT CGGCGCCGGT AAACTGATTG AACTGCTGTT CGGCCTCAAC
TATCACATCG CCGTAGTGCT GGTCGGCGTG CTGATGATGA TGTACGTGCT GTTCGGCGGG
ATGCTGGCAA CAACGTGGGT GCAAATTATC AAAGCCGTCC TGTTGCTGTT TGGCGCCAGT
TTTATGGCCT TTATGGTGAT GAAACACGTC GGCTTTAGCT TCAATAATCT GTTTACCGAA
GCCATGGCGG TACACCCGAA AGGCACGGCG ATTATGAGCC CTGGAGGATT GGTGCAAGAT
CCGATTTCGG CGTTGTCGTT GGGTCTGGGG TTGATGTTCG GCACCGCCGG CTTGCCGCAT
ATTCTGATGC GTTTCTTTAC GGTCAGCGAT GCCCGCGAAG CGCGCAAGAG CGTGTTCTAC
GCCACCGGTT TTATGGGCTA TTTCTACATT CTGACCTTTA TTATCGGCTT CGGCGCTATC
ATGCTGGTGG GGGCGAATCC CGCCTATAAA GATGCGGCGG GCGCGCTGAT TGGCGGCAAT
AACATGGCGG CGGTGCATCT GGCCAACGCG GTAGGCGGCA ACCTGTTCCT CGGCTTTATT
TCGGCAGTGG CGTTTGCCAC CATTCTGGCG GTGGTTGCCG GTCTGACGCT GGCGGGCGCA
TCGGCGGTGT CGCATGATTT GTACGCTAAC GTGTTCCGCA AAGGCGCAAC CGAACGTGAA
GAACTGAAGG TGTCGAAAAT CACCGTCCTG GTGCTGGGCG TGATCGCCAT TATCCTCGGC
GTCCTGTTTG AAAATCAGAA CATCGCCTTT ATGGTGGGCC TGGCGTTTGC TATCGCCGCG
AGCTGCAACT TCCCTATCAT TCTGCTTTCC ATGTACTGGT CAAAACTGAC CACGCGCGGC
GCTATGCTGG GCGGCTGGTT AGGTTTACTG ACAGCGGTGG TGCTGATGAT TCTTGGCCCT
ACCATTTGGG TGCAGATCCT CGGCCACGAA AAAGCGATCT TCCCGTATGA GTATCCGGCG
CTGTTCTCTA TCAGCGTGGC GTTCCTGGGG ATCTGGTTTT TCTCGGCCAC CGATAACTCG
GCAGAAGGCA ACCGTGAACG TGAGCAGTTC CGCGCTCAGT TTATCCGCTC CCAAACGGGA
TTCGGCGTAC AACAAGGGCG TGCGCATTAA
|
|---|
| Protein sequence | MKRVLTALAA ALPFAAHAAD AISGAVERQP TNWQAIIMFL IFVVFTLGIT YWASKRVRSR
SDYYTAGGNI TGFQNGLAIA GDYMSAASFL GISALVFTSG YDGLIYSLGF LVGWPIILFL
IAERLRNLGR YTFADVASYR LKQGPIRILS ACGSLVVVAL YLIAQMVGAG KLIELLFGLN
YHIAVVLVGV LMMMYVLFGG MLATTWVQII KAVLLLFGAS FMAFMVMKHV GFSFNNLFTE
AMAVHPKGTA IMSPGGLVQD PISALSLGLG LMFGTAGLPH ILMRFFTVSD AREARKSVFY
ATGFMGYFYI LTFIIGFGAI MLVGANPAYK DAAGALIGGN NMAAVHLANA VGGNLFLGFI
SAVAFATILA VVAGLTLAGA SAVSHDLYAN VFRKGATERE ELKVSKITVL VLGVIAIILG
VLFENQNIAF MVGLAFAIAA SCNFPIILLS MYWSKLTTRG AMLGGWLGLL TAVVLMILGP
TIWVQILGHE KAIFPYEYPA LFSISVAFLG IWFFSATDNS AEGNREREQF RAQFIRSQTG
FGVQQGRAH
|
|---|
| |