Gene SeSA_A4525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4525 
Symbol 
ID6518632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4401341 
End bp4402030 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content58% 
IMG OID642749471 
ProductLrgB family protein 
Protein accessionYP_002117207 
Protein GI194737812 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAACG TTCAGTTAAG CGTACTGTGC CTGGTGATTA CGCTGGGGAT TTACTTCGCC 
AATAAGCGTC TGTATCGCCG TTTTCGCAAA CTGCCGTTGA TGCCATTAGT GTTGACGCCA
GCACTGCTGG TGTTAATGCT GGTGTTCGGT CATATCTCCT GGCAAAACTA TATTGGTGAA
TCGCACTGGC TATTGTGGCT GCTCGGCCCG GCGACCATTG CCTTTGCGGT GCCGGTGTAC
GATAACCTCG CGATTATCAA ACGTCACTGG ATGTCGCTCA CCGCGGGCGT AGTGACGGCG
ACGGTGGTGG CGGTCACCAG TTCCGTTTGG CTGGCGCGTC TGTTCACGTT ATCGGATGAG
ATTCAGCGTA GTCTGGCGGT ACGTTCCGTT ACTACGCCGT TTGCGCTGGC GGCGGCAGAA
CCCCTGGGCG GGCAGCCGGA TCTGGTGGCG CTGTTCGTGG TCGTCACTGG CGTGTTTGGC
ATGGCGGTCG GCGACGCGCT ATTTTTGCGT CTCTCTATCC GGGAAGGCAT GGCAAAAGGG
GCAGGATTTG GCGCGGCGTC ACATGGGGCG GGCACGGCGC GTTCCTATGA ACTTGGTCAG
CAGGAGGGTG TCGTCGCCAG TCTGGTAATG ATGCTGTCCG GCGTGGTGAT GGTGCTGGCA
GCCCCGCTGG TGGCGAGGGT AATGTTCTGA
 
Protein sequence
MNNVQLSVLC LVITLGIYFA NKRLYRRFRK LPLMPLVLTP ALLVLMLVFG HISWQNYIGE 
SHWLLWLLGP ATIAFAVPVY DNLAIIKRHW MSLTAGVVTA TVVAVTSSVW LARLFTLSDE
IQRSLAVRSV TTPFALAAAE PLGGQPDLVA LFVVVTGVFG MAVGDALFLR LSIREGMAKG
AGFGAASHGA GTARSYELGQ QEGVVASLVM MLSGVVMVLA APLVARVMF