Gene SeSA_A4517 details

Gene Information

• Locus tag: SeSA_A4517
• Symbol: soxR
• ID: 6516411
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633
• Kingdom: Bacteria
• Replicon accession: NC_011094
• Strand: +
• Start bp: 4394940
• End bp: 4395398
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642749463
• Product: redox-sensitive transcriptional activator SoxR
• Protein accession: YP_002117199
• Protein GI: 194737432
• COG category: [K] Transcription
• COG ID: [COG0789] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR01950] redox-sensitive transcriptional activator SoxR

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAAAAAA AATCTCCCCG TTTAAAAGCC TTACTGACGC CGGGGGAAGT TGCGAAACGT 
AGCGGTGTTG CTGTGTCCGC CCTGCACTTC TATGAAAGCA AAGGGCTAAT TACCAGTATC 
CGTAATAGCG GTAACCAACG GCGATACAAG CGTGACGTGT TGCGTTATGT CGCGATTATC 
AAGATCGCCC AGCGTATCGG CATCCCGCTG GCAACTATCG GCGACGCGTT TGGTATCTTG 
CCGGAAGGAC ATACGTTAAG CGCGAAAGAG TGGAAGCAGC TCTCCTCGCA GTGGCGCGAA 
GAGTTAGACC GACGTATTCA TACGCTGGTG GCGTTGCGCG ATGAGCTGGA CGGTTGTATC 
GGCTGCGGCT GTTTATCGCG TAGCGACTGT CCGCTGCGAA ATCCAGGCGA CAGGCTTGGC 
GAACACGGGA CGGGTGCCCG GCTGCTTGAA GATGATTAA 

 

Protein sequence

MEKKSPRLKA LLTPGEVAKR SGVAVSALHF YESKGLITSI RNSGNQRRYK RDVLRYVAII 
KIAQRIGIPL ATIGDAFGIL PEGHTLSAKE WKQLSSQWRE ELDRRIHTLV ALRDELDGCI 
GCGCLSRSDC PLRNPGDRLG EHGTGARLLE DD