| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4491 |
|---|
| Symbol | |
|---|
| ID | 6518475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 4354476 |
|---|
| End bp | 4355513 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642749441 |
|---|
| Product | tRNA-dihydrouridine synthase A |
|---|
| Protein accession | YP_002117177 |
|---|
| Protein GI | 194736682 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0345216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGATA ATCATGAAAC AAAAAAAATT AATCAAACCA GCGTGATGCC TGAAAAAACT
GGTGTTTACT GGAATTCTCG GTTTAGCATT GCTCCTATGC TCGACTGGAC GGACAGACAT
TGCCGCTATT TCCTGCGTTT GCTGTCTCGC CAGACGCTGC TCTACACCGA AATGGTGACC
ACGGGCGCGA TTATTCACGG TAAGGGTGAC TATCTGGCTT ACAGCGAAGA AGAGCATCCG
GTCGCTCTAC AGCTTGGTGG AAGCGATCCG GCTCAGCTTG CGCATTGTGC AAAGCTGGCG
GAAGCGCGTG GCTACGATGA AATTAACCTC AACGTGGGGT GCCCCTCCGA TCGCGTGCAA
AACGGTATGT TTGGCGCCTG TTTGATGGGC AATGCGCAAC TGGTCGCCGA TTGTGTTAAA
GCCATGCGTG ATGTCGTCTC GATTCCGGTA ACGGTAAAAA CCCGCATTGG TATTGACGAT
CAGGACAGCT ATGCGTTTCT GTGTGATTTC ATCAATACGG TTTCCGGTCA GGGCGAATGC
GAGATGTTTA TTATCCATGC GCGCAAAGCT TGGCTTTCTG GCTTAAGCCC GAAAGAAAAT
CGTGAGATCC CGCCGCTGGA TTACCCGCGC GTCTATCAGC TAAAGCGGGA TTTTCCGCAC
CTGACCATGT CCATTAACGG CGGCATCAAA TCGCTGGAAG AGGCGAAGGA GCACCTGCGC
CATATGGATG GCGTCATGGT TGGCCGCGAA GCTTATCAGA ATCCGGGTAT ACTGGCCGCG
GTGGATCGGG AGATCTTTGG CGCCGATACC ACCGATGCCG ACCCGGTTAC GGTGGTTCGC
GCGATGTATC CCTATATTGA GCGTGAATTG AGCCAGGGAG CGTATCTGGG GCATATCACT
CGCCATATGC TGGGGTTGTT CCAGGGCATC CCCGGCGCGC GGCAGTGGCG TCGCTATCTG
AGCGAAAACG CCCATAAAGC TGGCGCGGAT GTTGCTGTAC TGGAGCAGGC GCTAAAACTG
GTAGCAGACA AGCGTTAA
|
|---|
| Protein sequence | MHDNHETKKI NQTSVMPEKT GVYWNSRFSI APMLDWTDRH CRYFLRLLSR QTLLYTEMVT
TGAIIHGKGD YLAYSEEEHP VALQLGGSDP AQLAHCAKLA EARGYDEINL NVGCPSDRVQ
NGMFGACLMG NAQLVADCVK AMRDVVSIPV TVKTRIGIDD QDSYAFLCDF INTVSGQGEC
EMFIIHARKA WLSGLSPKEN REIPPLDYPR VYQLKRDFPH LTMSINGGIK SLEEAKEHLR
HMDGVMVGRE AYQNPGILAA VDREIFGADT TDADPVTVVR AMYPYIEREL SQGAYLGHIT
RHMLGLFQGI PGARQWRRYL SENAHKAGAD VAVLEQALKL VADKR
|
|---|
| |