Gene SeSA_A4485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4485 
Symbol 
ID6517559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4351026 
End bp4351748 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content40% 
IMG OID642749436 
Productguanine nucleotide exchange factor SopE 
Protein accessionYP_002117172 
Protein GI194734219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00777201 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACAAAAA TAACTTTATC TCCCCAAAAT TTTAGAATCC AAAAACAGGA AACCACACTA 
CTAAAAGAAA AATCAACCGA GAAAAATTCT TTAGCAAAAA GTATTCTCGC AGTAAAAAAT
CACTTCATCG AATTAAGGTC AAAATTATCG GAACGTTTTA TTTCGCATAA GAACACTGAG
TCTTCTGCAA CACACTTTCA CCGAGGAAGC GCATCTGAGG GCCGGGCAGT GTTGACAAAT
AAAGTCGTTA AAGATTTTAT GCTTCAAACG CTCAATGATA TAGATATTAG AGGTAGTGCG
AGTAAAGACC CCGCATACGC CAGCCAGACC CGTGAAGCTA TACTATCAGC AGTTTACAGC
AAGAATAAAG ATCAGTGTTG TAATTTGCTC ATCAGCAAAG GGATCAACAT AGCGCCTTTT
CTTCAGGAAA TTGGCGAAGC AGCGAAAAAT GCAGGTCTGC CCGGAACAAC CAAAAATGAC
GTTTTTACGC CAAGCGGCGC AGGGGCCAAT CCTTTTATAA CTCCGTTGAT TTCATCAGCA
AACAGTAAGT ATCCACGTAT GTTTATCAAT CAACATCAGC AGGCATCCTT TAAAATCTAT
GCGGAGAAGA TCATTATGAC AGAAGTTGCA CCACTGTTTA ATGAGTGTGC TATGCCGACT
CCACAGCAAT TCCAACTGAT ACTAGAAAAC ATTGCTAATA AATATATACA AAACACTCCC
TGA
 
Protein sequence
MTKITLSPQN FRIQKQETTL LKEKSTEKNS LAKSILAVKN HFIELRSKLS ERFISHKNTE 
SSATHFHRGS ASEGRAVLTN KVVKDFMLQT LNDIDIRGSA SKDPAYASQT REAILSAVYS
KNKDQCCNLL ISKGINIAPF LQEIGEAAKN AGLPGTTKND VFTPSGAGAN PFITPLISSA
NSKYPRMFIN QHQQASFKIY AEKIIMTEVA PLFNECAMPT PQQFQLILEN IANKYIQNTP