Gene SeSA_A4395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4395 
SymbolaceA 
ID6518035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp4269644 
End bp4270948 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content56% 
IMG OID642749346 
Productisocitrate lyase 
Protein accessionYP_002117082 
Protein GI194736131 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC GTACTCAACA AATCGAAGAA TTACAGAAAG AGTGGACACA ACCGCGCTGG 
GAAGGCATCA CCCGCCCGTA CAGCGCGGAG GAGGTGGTGA AATTACGCGG CTCGGTTAAC 
CCGGAATGCA CGCTGGCGCA GCTCGGCGCC GCGAAAATGT GGCGGCTGTT GCACGGTGAA 
GCGAAAAAAG GCTATATCAA CAGCCTTGGC GCGCTGACTG GCGGTCAGGC GTTGCAGCAG 
GCGAAAGCCG GTATTGAGGC GATTTATCTT TCAGGCTGGC AGGTGGCGGC AGATGCCAAC 
CTTGCATCCA GCATGTATCC GGATCAATCG TTGTACCCGG CAAACTCTGT TCCGGCGGTA 
GTGGATCGGA TCAACAACAC TTTCCGTCGT GCAGATCAGA TCCAGTGGGC ATCCGGTATT 
GAACCCAACG ATCCGCGCTA TGTGGATTAC TTCCTGCCGA TCGTTGCTGA TGCGGAAGCC 
GGTTTTGGCG GCGTTCTGAA TGCCTTCGAA CTGATGAAAT CGATGATTGA AGCCGGTGCA 
GCGGCCGTTC ACTTCGAAGA TCAGCTGGCG TCGGTGAAGA AATGCGGCCA TATGGGCGGC 
AAGGTGCTGG TCCCCACGCA GGAGGCGATT CAGAAACTGA TTGCTGCGCG TCTGGCCGCT 
GATGTGATGG GCGTCCCGAC GCTGGTGATT GCGCGTACCG ATGCGGATGC GGCAGATCTG 
ATTACCTCCG ACTGCGATCC CTATGACAGC GGTTTCATTA CCGGCGAACG CACCAGCGAA 
GGTTTCTACC GCACCCATGC GGGCATTGAG CAGGCGATCA GCCGCGGTCT GGCGTATGCC 
CCGTATGCCG ATCTGGTATG GTGCGAAACC TCTACGCCGG ATCTCGAACT GGCGCGTCGT 
TTTGCCGATG CTATCCACGC GAAGTATCCG GGCAAACTGC TGGCCTATAA CTGTTCACCA 
TCCTTCAACT GGCAGAAGAA TCTGGACGAC AAGACCATTG CCAGCTTCCA GCAGCAGTTG 
TCGGACATGG GTTACAAATA CCAGTTTATT ACCCTGGCGG GCATCCACAG CATGTGGTTC 
AACATGTTCG ACCTGGCACA TGCATACGCT CAGGGCGAGG GCATGAAACA CTATGTTGAG 
AAGGTTCAAC AACCCGAGTT CGCCGCGGCG AAAGATGGCT ACACCTTTGT TTCCCACCAG 
CAGGAAGTGG GTACTGGTTA CTTCGACAAA GTCACCACCA TTATTCAGGG CGGCGCGTCA 
TCCGTTACCG CATTAACGGG TTCCACCGAA GAATCGCAGT TTTGA
 
Protein sequence
MKTRTQQIEE LQKEWTQPRW EGITRPYSAE EVVKLRGSVN PECTLAQLGA AKMWRLLHGE 
AKKGYINSLG ALTGGQALQQ AKAGIEAIYL SGWQVAADAN LASSMYPDQS LYPANSVPAV 
VDRINNTFRR ADQIQWASGI EPNDPRYVDY FLPIVADAEA GFGGVLNAFE LMKSMIEAGA 
AAVHFEDQLA SVKKCGHMGG KVLVPTQEAI QKLIAARLAA DVMGVPTLVI ARTDADAADL 
ITSDCDPYDS GFITGERTSE GFYRTHAGIE QAISRGLAYA PYADLVWCET STPDLELARR 
FADAIHAKYP GKLLAYNCSP SFNWQKNLDD KTIASFQQQL SDMGYKYQFI TLAGIHSMWF 
NMFDLAHAYA QGEGMKHYVE KVQQPEFAAA KDGYTFVSHQ QEVGTGYFDK VTTIIQGGAS 
SVTALTGSTE ESQF