| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4393 |
|---|
| Symbol | metA |
|---|
| ID | 6518574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 4266813 |
|---|
| End bp | 4267742 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642749344 |
|---|
| Product | homoserine O-succinyltransferase |
|---|
| Protein accession | YP_002117080 |
|---|
| Protein GI | 194737138 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1897] Homoserine trans-succinylase |
|---|
| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.442234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATTC GCGTGCTGGA CGAGCTACCC GCCGTCAATT TTTTACGTGA GGAGAATGTC
TTCGTCATGA CGACTTCTCG CGCATCAGGT CAGGAAATTC GCCCGCTAAA GGTACTTATC
CTTAACCTGA TGCCGAAGAA GATTGAAACG GAAAATCAGT TTCTGCGCTT GCTATCGAAC
TCGCCATTAC AGGTCGATAT TCAACTACTG CGGATAGATG CCCGCGAGTC GAGGAACACG
CCAGCCGAGC ATCTGAACAA CTTTTACTGT AACTTCGACG ATATCTGCGA TCAGAACTTT
GATGGGCTTA TCGTGACCGG AGCGCCGCTG GGTCTGGTGG AGTTTAATGA CGTGGCTTAC
TGGCCGCAGA TTAGGCAGGT GCTGGAATGG GCGAAAGATC ACGTTACTTC GACGCTATTT
GTCTGTTGGG CCGTTCAGGC CGCACTCAAT ATTCTTTATG GTATCCCTAA GCAGACCCGT
ACAGATAAAC TTTCCGGCGT CTATGAACAT CACATCCTTC ATCCTCATGC TCTGTTGACG
CGTGGTTTTG ATGATTCGTT TCTTGCGCCA CACTCACGCT ATGCCGATTT CCCGGCGGCG
CTAATACGGG ATTATACGGA TCTTGAAATT CTGGCCGAAA CAGAAGAGGG GGATGCGTAC
CTGTTTGCCA GCAAAGATAA ACGTATTGCG TTTGTCACCG GTCATCCTGA ATATGACGCC
CATACGTTAG CGGGTGAATA TTTTCGTGAC GTTGAGGCCG GGTTAAATCC GGAGGTTCCG
TACAACTATT TCCCAAAAAA CGATCCGCAA AACATACCGC GCGCAACCTG GCGCAGCCAC
GGTAATTTAC TGTTTACTAA CTGGCTCAAC TATTATGTCT ACCAGATTAC GCCATATGAT
CTGCGTCACA TGAATCCAAC CCTGGATTAA
|
|---|
| Protein sequence | MPIRVLDELP AVNFLREENV FVMTTSRASG QEIRPLKVLI LNLMPKKIET ENQFLRLLSN
SPLQVDIQLL RIDARESRNT PAEHLNNFYC NFDDICDQNF DGLIVTGAPL GLVEFNDVAY
WPQIRQVLEW AKDHVTSTLF VCWAVQAALN ILYGIPKQTR TDKLSGVYEH HILHPHALLT
RGFDDSFLAP HSRYADFPAA LIRDYTDLEI LAETEEGDAY LFASKDKRIA FVTGHPEYDA
HTLAGEYFRD VEAGLNPEVP YNYFPKNDPQ NIPRATWRSH GNLLFTNWLN YYVYQITPYD
LRHMNPTLD
|
|---|
| |