Gene SeSA_A4374 details

Gene Information

• Locus tag: SeSA_A4374
• Symbol: thiC
• ID: 6515514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633
• Kingdom: Bacteria
• Replicon accession: NC_011094
• Strand: -
• Start bp: 4246493
• End bp: 4248388
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642749326
• Product: thiamine biosynthesis protein ThiC
• Protein accession: YP_002117065
• Protein GI: 194734581
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0422] Thiamine biosynthesis protein ThiC
• TIGRFAM ID: [TIGR00190] thiamine biosynthesis protein ThiC

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.701948
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTACAA CAACGTTAAC CCGCCGCGAG CAGCGCGCTA AAGCCCAGCA TTTTATCGAT 
ACGCTGGAAG GCACCGCATT TCCCAACTCG AAACGCATCT ACGTGACCGG TTCGCAGCAT 
GATATTCGCG TACCGATGCG CGAAATTCAA CTTAGCCCAA CGCTCATCGG CGGCAGCAAA 
GACAACCCGC AGTTTGAAGA GAACGAAGCC GTGCCGGTGT ACGACACCTC CGGCCCCTAT 
GGCGATCCTG AGGTGGCGAT TAACGTCCAG CAGGGTCTGG CGAAACTGCG CCAGCCATGG 
ATTGACGCAC GTAACGATAG CGAAGAATTA GACGACCGTA GCTCGGCTTA TACCAGAGAA 
CGTCTGGCCG ACGATGGCCT GGACGATCTG CGTTTTACCG GCCTGCTGAC GCCAAAACGC 
GCTAAAGCGG GCAAGCGCGT CACCCAGTTA CACTACGCCC GCAACGGGAT CGTCACTCCC 
GAAATGGAGT TCATCGCCAT CCGTGAAAAT ATGGGCCGCG AGCGCATTCG CAGTGAAGTA 
CTGCGCCACC AGCATCCGGG GATGAGCTTT GGCGCACGCC TGCCGGAAAA CATCACCCCG 
GAATTCGTGC GTGATGAAGT CGCCGCCGGA CGCGCCATCA TCCCCGCCAA CATCAACCAC 
CCGGAATCGG AGCCGATGAT TATTGGCCGC AACTTCCTGG TGAAGGTCAA CGCCAATATC 
GGCAACTCGG CGGTGACCTC CTCTATCGAA GAAGAGGTGG AAAAACTGGT GTGGGCGACG 
CGCTGGGGGG CGGATACGGT AATGGACCTT TCCACCGGGC GCTATATTCA CGAAACCCGT 
GAGTGGATCC TGCGTAATAG CCCAGTACCA ATCGGCACGG TGCCGATCTA CCAGGCGCTG 
GAAAAGGTCA ACGGGATCGC CGAGGATCTT ACCTGGGAAG CCTTCCGCGA CACGCTGCTG 
GAGCAGGCCG AACAGGGCGT CGACTACTTC ACCATTCACG CGGGCGTGCT GCTGCGTTAC 
GTGCCGATGA CCGCCAAGCG CCTGACCGGC ATTGTCTCGC GCGGCGGTTC GATCATGGCG 
AAGTGGTGTC TCTCCCATCA CAAAGAGAAC TTCCTGTTCG AACATTTCCG CGAGATTTGC 
GAAATCTGCG CCGCCTACGA CGTTTCCCTG TCGCTGGGCG ACGGCCTGCG ACCGGGATCG 
ATTCAGGACG CGAACGACGA AGCGCAGTTC TCCGAGCTGC ATACGCTGGG CGAGCTGACC 
AAAATCGCCT GGGAATACGA CGTGCAGGTG ATGATTGAAG GCCCGGGCCA CGTGCCGATG 
CATATGATTC AGCGCAACAT GACCGAAGAG CTGGAGCACT GCCATGAAGC GCCGTTCTAC 
ACCTTAGGGC CGCTGACTAC CGATATCGCG CCGGGCTATG ACCACTTCAC CTCCGGCATT 
GGCGCGGCGA TGATCGGCTG GTTCGGCTGT GCGATGCTGT GTTACGTGAC GCCGAAAGAG 
CATCTCGGCC TGCCGAACAA AGAAGATGTG AAGCAGGGGC TGATCACCTA CAAGATCGCC 
GCCCACGCCG CTGACTTAGC CAAAGGGCAT CCGGGCGCGC AGATTCGCGA TAACGCGATG 
TCGAAAGCGC GCTTTGAATT CCGCTGGGAG GATCAGTTTA ACCTCGCGCT CGACCCGTTC 
ACCGCCCGCG CCTGGCACGA TGAAACCCTG CCACAGGAGT CCGGCAAAGT GGCGCACTTT 
TGCTCGATGT GCGGGCCGAA ATTCTGCTCA ATGAAAATCA GCCAGGAAGT TCGTGATTAC 
GCCGCCGCGC AAACTATTGA AGTCGGGATG GCGGATATGT CGGAAAACTT CCGCGCCAAA 
GGCGGCGAAA TCTATCTCAA GCGGGAGGAA GTCTGA 

 

Protein sequence

MSTTTLTRRE QRAKAQHFID TLEGTAFPNS KRIYVTGSQH DIRVPMREIQ LSPTLIGGSK 
DNPQFEENEA VPVYDTSGPY GDPEVAINVQ QGLAKLRQPW IDARNDSEEL DDRSSAYTRE 
RLADDGLDDL RFTGLLTPKR AKAGKRVTQL HYARNGIVTP EMEFIAIREN MGRERIRSEV 
LRHQHPGMSF GARLPENITP EFVRDEVAAG RAIIPANINH PESEPMIIGR NFLVKVNANI 
GNSAVTSSIE EEVEKLVWAT RWGADTVMDL STGRYIHETR EWILRNSPVP IGTVPIYQAL 
EKVNGIAEDL TWEAFRDTLL EQAEQGVDYF TIHAGVLLRY VPMTAKRLTG IVSRGGSIMA 
KWCLSHHKEN FLFEHFREIC EICAAYDVSL SLGDGLRPGS IQDANDEAQF SELHTLGELT 
KIAWEYDVQV MIEGPGHVPM HMIQRNMTEE LEHCHEAPFY TLGPLTTDIA PGYDHFTSGI 
GAAMIGWFGC AMLCYVTPKE HLGLPNKEDV KQGLITYKIA AHAADLAKGH PGAQIRDNAM 
SKARFEFRWE DQFNLALDPF TARAWHDETL PQESGKVAHF CSMCGPKFCS MKISQEVRDY 
AAAQTIEVGM ADMSENFRAK GGEIYLKREE V