| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4349 |
|---|
| Symbol | |
|---|
| ID | 6518840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 4225025 |
|---|
| End bp | 4225987 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642749303 |
|---|
| Product | biotin--protein ligase |
|---|
| Protein accession | YP_002117046 |
|---|
| Protein GI | 194734870 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000983671 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATA CTACCGTTCC CCTGACGCTA ATCTCACTAC TTGCCGACGG AGAGTTTCAC
TCAGGCGAGC AGTTGGGTGA ACGGCTGGGA ATGAGCCGCG CGGCGATTAA TAAACATATC
CAGACATTAC GCGACTGGGG AGTAGATGTA TTTACCGTTC CGGGGAAAGG ATATAGCTTG
CCGGAACCCA TCCAGTTACT GGATGCTGAC CGTATTCATA GCCAACTGGA TAGCGGAAAC
GTGGCGGTAT TGCCCGTTAT CGATTCAACC AATCAGTATT TACTTGATCG AATTGGCGAG
CTGCGCTCAG GCGATGCCTG TGTAGCAGAA TACCAACAGG CAGGGCGTGG TCGTCGCGGG
CGTAAATGGT TCTCACCGTT TGGCGCGAAT CTATATCTTT CAATGTACTG GCGTCTGGAG
CAGGGGCCTG CGGCGGCAAT AGGCTTGAGT CTGGTCATTG GAATTGTGAT GGCGGAAGTG
CTGCGTGAAC TGGGCGCTGA TAAAGTTCGT GTGAAGTGGC CTAACGACCT CTACCTGCTG
GATCGCAAAC TGGCGGGTAT TCTGGTCGAG TTAACCGGTA AAACGGGCGA TGCCGCACAA
ATAGTGATTG GCGCTGGTAT TAACATGGCA ATGCGTCGTG TAGAAGAGGA CGTGATAAAT
CAGGGATGGA TCACGTTGCA GGAGGCCGGA ATTACGCTCG ACCGCAATAT GCTGGCCGCA
AAGCTGATTT ATAAGCTACG TGCTGCGCTT GAGCTTTTTG AGCAAGAAGG TCTTTCTCCT
TATCTTTCGC GCTGGAAAAA ACTGGATAAT TTTATTGATC GTCCGGTAAA ACTAATTATT
GGCGACAAAG AAATATTTGG TATTTCTCGC GGCATTGATA CTCAGGGCGC ATTATTGCTT
GAACAGGATG GTGTGATTAA ACCCTGGATG GGCGGAGAAA TATCGCTGCG AAGCGCCGAA
TAG
|
|---|
| Protein sequence | MKDTTVPLTL ISLLADGEFH SGEQLGERLG MSRAAINKHI QTLRDWGVDV FTVPGKGYSL
PEPIQLLDAD RIHSQLDSGN VAVLPVIDST NQYLLDRIGE LRSGDACVAE YQQAGRGRRG
RKWFSPFGAN LYLSMYWRLE QGPAAAIGLS LVIGIVMAEV LRELGADKVR VKWPNDLYLL
DRKLAGILVE LTGKTGDAAQ IVIGAGINMA MRRVEEDVIN QGWITLQEAG ITLDRNMLAA
KLIYKLRAAL ELFEQEGLSP YLSRWKKLDN FIDRPVKLII GDKEIFGISR GIDTQGALLL
EQDGVIKPWM GGEISLRSAE
|
|---|
| |