Gene SeSA_A4296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4296 
Symbol 
ID6517270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4166457 
End bp4167221 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content52% 
IMG OID642749254 
Productepimerase 
Protein accessionYP_002117001 
Protein GI194733952 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCC AGTTTGCCGG ATTAACGCGC GAAGCATGTG TGGCATTGTT AGCGTCATAT 
CCGCTTAGTG TGGGTATTCT GGCAGGGCAG TGGATTGCGT TGCATCGCTA TCTGCAACAG
TTGGAAGCGT TAAACCAGCC GCTGTTGCAT TTGGATTTGA TGGATGGTCA ATTTTGCCCG
CAGTTTACCG TTGGGCCATG GGCAGTTGGG CAACTGCCGC AAACCTTTAT CAAAGATGTT
CATTTGATGG TAGCGGATCA ATGGACGGCG GCGCAAGCCT GCGTGAAGGC GGGCGCACAC
TGCATCACGC TTCAGGCTGA AGGCGATATT CATCTGCATC ATACGCTAAG CTGGCTTGGT
CAGCAGACCG TGCCCGTTAT TGGCGGTGAA ATGCCGGTGA TCCGGGGGAT TAGTTTATGC
CCGGCAACGC CTCTGGATGT CATTGTCCCC ATTCTGAGCG ACATCGAGGT TATTCAACTA
CTGGCAGTGA ACCCTGGATA CGGCAGTAAA ATGCGCTCCA GTGATTTGCA CGAGCGCGTG
GCGCAGCTTC TCTGTCTACT TGGTGATAAA CGCGAAGGTA AAATTATCGT TATTGATGGG
TCGTTAACGC AGGAGCAATT GCCTTCGCTG ATTGCACAGG GCATCGATCG TGTTGTTTCT
GGTAGTGCGT TATTTCGTGA TGATCGGCTG GTTGAGAATA CGCGGAGCTG GAGGGCGATG
TTTAAGGTTG CCGGGGATAC TACTTTCTTA CCCTCCACAG CATAA
 
Protein sequence
MNSQFAGLTR EACVALLASY PLSVGILAGQ WIALHRYLQQ LEALNQPLLH LDLMDGQFCP 
QFTVGPWAVG QLPQTFIKDV HLMVADQWTA AQACVKAGAH CITLQAEGDI HLHHTLSWLG
QQTVPVIGGE MPVIRGISLC PATPLDVIVP ILSDIEVIQL LAVNPGYGSK MRSSDLHERV
AQLLCLLGDK REGKIIVIDG SLTQEQLPSL IAQGIDRVVS GSALFRDDRL VENTRSWRAM
FKVAGDTTFL PSTA