Gene SeSA_A4293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4293 
Symbol 
ID6517741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp4164127 
End bp4165170 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content50% 
IMG OID642749251 
Producthypothetical protein 
Protein accessionYP_002116998 
Protein GI194735672 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATTTA TGGAGAAAAA AATGGCAAGA CACAGCATTA AAATGATCGC CTTACTCACT 
GCGTTTGGTC TGGCATCTGC GGTAATGACC GTGCAGGCGG CAGAGCGGAT TGCTTTTATT 
CCCAAACTGG TTGGCGTGGG CTTTTTTACC AGTGGCGGCA ATGGCGCGCA GGAAGCGGGA 
AAAGCGCTGG GTATTGACGT AACTTACGAT GGCCCTACAG AGCCCAGCGT CTCAGGCCAG 
GTTCAACTGG TGAATAACTT TGTCAATCAG GGGTATGACG CCATTATCGT TTCTGCCGTT 
TCGCCTGATG GCCTGTGCCC GGCGTTGAAG CGGGCAATGC AAAGAGGCGT GAAAATATTA 
ACCTGGGATT CCGATACCAA GCCGGAGTGC CGTTCTTACT ATATCAATCA AGGGACGCCA 
AAACAGCTCG GCAGCATGCT GGTAGAGATG GCCGCTCATC AGGTGGACAA AGAGAAAGCG 
AAAGTCGCTT TCTTCTATTC CAGCCCAACG GTGACCGACC AGAACCAGTG GGTAAAAGAA 
GCTAAAGCCA AAATTAGCCA GGAACATCCG GGGTGGGAGA TAGTCACTAC CCAGTTTGGC 
TATAACGATG CCACGAAATC GCTCCAGACG GCGGAAGGTA TCATCAAAGC GTATCCCGAT 
CTGGATGCCA TCATCGCGCC TGACGCTAAC GCTTTACCTG CTGCGGCACA GGCGGCGGAG 
AACCTTAAAC GCAATAATCT CGCGATTGTT GGTTTTAGTA CGCCGAATGT AATGCGCCCT 
TATGTTCAGC GCGGCACTGT TAAAGAGTTT GGCCTGTGGG ATGTCGTCCA ACAGGGAAAA 
ATTTCCGTAT ATGTCGCCAA CGCGTTGCTG AAAAATATGC CAATGAATGT CAGTGATTCA 
CTGGATATTC CCGGCATCGG CAAAGTCACC GTTTCACCTA ATAGTGAGCA GGGATATCAC 
TATGAGGCAA AAGGTAACGG CATTGTGTTA TTGCCGGAGC GTGTCATTTT CAACAAAGAC 
AATATCGACA AATATGATTT CTGA
 
Protein sequence
MKFMEKKMAR HSIKMIALLT AFGLASAVMT VQAAERIAFI PKLVGVGFFT SGGNGAQEAG 
KALGIDVTYD GPTEPSVSGQ VQLVNNFVNQ GYDAIIVSAV SPDGLCPALK RAMQRGVKIL 
TWDSDTKPEC RSYYINQGTP KQLGSMLVEM AAHQVDKEKA KVAFFYSSPT VTDQNQWVKE 
AKAKISQEHP GWEIVTTQFG YNDATKSLQT AEGIIKAYPD LDAIIAPDAN ALPAAAQAAE 
NLKRNNLAIV GFSTPNVMRP YVQRGTVKEF GLWDVVQQGK ISVYVANALL KNMPMNVSDS 
LDIPGIGKVT VSPNSEQGYH YEAKGNGIVL LPERVIFNKD NIDKYDF