Gene SeSA_A4292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4292 
Symbol 
ID6519790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4163121 
End bp4164119 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content50% 
IMG OID642749250 
Productinner membrane ABC transporter permease YdeZ 
Protein accessionYP_002116997 
Protein GI194736325 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAT GGCGACGCTA TAGCTGGGAA ATTGCGCTGG CAGCCTTATT GATCTTTGAA 
ATTCTGGCTT TCGGTCTGAT TAATCCACGT TTATTAGATA TTAATGTCTT ACTTTTTAGC
ACTAGCGATT TTATTTGTAT CGGTATTGTC GCTTTGCCGC TAACAATGGT TATTGTCAGC
GGTGGTATGG ATATTTCATT TGGTTCTACA ATCGGGCTAT GCGCGATTAC CCTGGGTGTG
CTGTTTCAGC TCGGTATGCC GCTACCTTTA GCGATTATTA TTACCCTACT ACTCGGCGCA
ATATGTGGGC TGATAAATGC CGGACTTATT ATTTATACCG GCGTAAACCC GTTGGTGATT
ACCCTGGGAA CCATGTATTT ATTTGGTGGT AGCGCATTAT TGTTATCTGG TATGGCTGGC
GCCACGGGTT ATGAAGGTAT TGGTGGATTT CCCACAGCGT TCACTGACTT TTCCAATATT
TCATTTCTTG GTATTCCCAT GCCGCTTATT TTTTTTCTTG TGTGCTGTCT GTTTTTCTGG
CTGCTCATGC ATCGCACGCA TATGGGACGC AACGTTTTCC TGATTGGCCA GAGCGCCCGT
GTCGCGCAGT ACAGCGCGAT CCCGGTGAAT CGCACGTTGT ATACCGTGTA TGCCATGACC
GGATGCGCCT CCGCGATCGC CGCCGTATTA CTGGTTTCTT ACTTTGGCTC CGCACGTTCG
GATCTGGGCG CCTCTTTCCT GATGCCGGCT ATTACGGCGG TTGTGCTGGG AGGCGCCAAT
ATTTATGGCG GCTCCGGGTC GATTATGGGG TCCGCGTTGG CGGCGCTGCT GGTGGGATTT
TTACAGCAGG GGCTACAGAT GGCCGGAGTG CCGAATCAAA TTTCCAGCGC ATTGTCCGGT
GCGCTTCTCA TTGTTGTTGT CGTTGGTCGT TCCGTCAGTT TGCATCGTCA CCAAATCCTT
GAATGGTACT CACGCCGTCG CAATGCGCAT CAGGCATGA
 
Protein sequence
MNPWRRYSWE IALAALLIFE ILAFGLINPR LLDINVLLFS TSDFICIGIV ALPLTMVIVS 
GGMDISFGST IGLCAITLGV LFQLGMPLPL AIIITLLLGA ICGLINAGLI IYTGVNPLVI
TLGTMYLFGG SALLLSGMAG ATGYEGIGGF PTAFTDFSNI SFLGIPMPLI FFLVCCLFFW
LLMHRTHMGR NVFLIGQSAR VAQYSAIPVN RTLYTVYAMT GCASAIAAVL LVSYFGSARS
DLGASFLMPA ITAVVLGGAN IYGGSGSIMG SALAALLVGF LQQGLQMAGV PNQISSALSG
ALLIVVVVGR SVSLHRHQIL EWYSRRRNAH QA