Gene SeSA_A4291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4291 
Symbol 
ID6519433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4162081 
End bp4163121 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content53% 
IMG OID642749249 
Productinner membrane ABC transporter permease YdeY 
Protein accessionYP_002116996 
Protein GI194738301 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATTCA TCCAAAATAA TCGGGAAGCG ACGGCACTGC TGGCAATAGT CTGTTTATTC 
GTGTTTCCTG GCGCGCTGGA TAGCCAGTAT TTGAGCGTGC AAACGCTGAC AATGGTTTTC
AGTAGCGCGC AAATTTTGAT GCTGTTGGCG ATTGGCGCGA CGATGGTAAT GCTCACCCGC
AATATTGATG TATCGGTGGG CTCGACGACA GGCATGTGCG CGGTATTGCT GGGAGTGATG
TTAAACGCCG GCTATAGCCT GCCGGTCGCC TGCCTGGCCA CACTAATATT AGGAATTGTC
GCCGGATTTT TTAATGGCGT ACTGGTTGCC TGGTTGAAGA TACCCGCCAT TGTCGCCACG
CTGGGAACGC TGGGCTTGTA TCGTGGGATC ATGCTGCTAT GGACAGGGGG GAAATGGATT
GAAGGATTAC CCGCAGGCTT AAAGCAACTC TCTGCTCCTG TGTTTCTGGG AATTTCCGCA
ATCGGCTGGT TTACCCTGGT GTTAGCGCTG CTTATGGCCT GGCTCCTGGC GAAAACCGCC
TTTGGCCGCA ATTTTTACGC CACCGGCGAT AACCTGCAGG GTGCCCGGCA ATTGGGTGTC
CGTACCGAGA TGGTACGCAT CATGGCATTT TCACTTAATG GCGGTATGGC GGCATTGGCT
GGAATCGTGT TTGCCTCGCA GATTGGCTTC ATTCCCAATC AAACCGGCAC GGGGCTGGAA
ATGAAAGCCA TCGCGGCCTG CGTATTGGGG GGAATTAGCC TGTTAGGCGG GTCAGGCACG
GTCATCGGCG CTATTCTCGG CGCTTATTTT CTTACGCAAA TCGATAGTGT GTTAGTGCTG
CTGCGTATCC CCGCCTGGTG GAACGATTTT ATTGCTGGCC TGGTATTGTT GGGCGTACTG
GTATTCGATG GGCGGCTGCG TTGTGCATTA CAACGCAATC TGCGCCGCCA GAAATATGCC
CGTTTTATAT CACCACCCAC TCCACTACAG ACGGAAGCAA AAACGCACGC ACAACAGAAT
AAAAACAAAG AGGTGGCATA A
 
Protein sequence
MKFIQNNREA TALLAIVCLF VFPGALDSQY LSVQTLTMVF SSAQILMLLA IGATMVMLTR 
NIDVSVGSTT GMCAVLLGVM LNAGYSLPVA CLATLILGIV AGFFNGVLVA WLKIPAIVAT
LGTLGLYRGI MLLWTGGKWI EGLPAGLKQL SAPVFLGISA IGWFTLVLAL LMAWLLAKTA
FGRNFYATGD NLQGARQLGV RTEMVRIMAF SLNGGMAALA GIVFASQIGF IPNQTGTGLE
MKAIAACVLG GISLLGGSGT VIGAILGAYF LTQIDSVLVL LRIPAWWNDF IAGLVLLGVL
VFDGRLRCAL QRNLRRQKYA RFISPPTPLQ TEAKTHAQQN KNKEVA