Gene SeSA_A4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4290 
Symbol 
ID6516176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4160549 
End bp4162084 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content51% 
IMG OID642749248 
Productputative ABC transporter ATP-binding protein ego 
Protein accessionYP_002116995 
Protein GI194737961 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.293045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCA GTCACAATAC TGCATCCCCT CTGATTTGTG TGCAGAACAT TTATAAAAGT 
TATTCCGGCG TCGAAGTACT AAAGGGAATT GACTTTACTC TGCATGCGGG AGAGGTGCAC
GCATTGCTTG GCGGCAATGG TGCGGGTAAA TCAACATTAA TGAAGATTAT TGCCGGTATA
GTCCCGCCAG ATGGAGGGAC TATCGATATT GCTGGTGTGC GTTGCAGTCA TTTAACGCCT
CTGAAGGCGC ACCAGTATGG CATTTACCTG GTTCCCCAGG AGCCTCTGTT ATTTCCGAGT
TTATCTGTGC GGGAAAATAT CTTGTTTGGC TTGCAGGGAC GTCAGGCCTC CACGGAAAAA
ATGCAGCAGC TATTAAAGGC GATGGGATGC CAACTCGATC CGGCGAGCGC TGCGGGTACG
CTTGATGTTG CAGACCGCCA GATCGTTGAA ATTATGCGCG GCTTGATGCG CGACTCGCGA
ATCTTAATTC TTGATGAGCC CACGGCGTCG TTAACGCCAG CCGAAACTGA CCGGTTATTT
ACGCGTTTGC AAGAGTTGCT GAAAAAGGGT GTCGGAATTG TATTTATTTC TCATAAGCTA
CCAGAAATTA GACAGTTAGC TCACTGCGTT AGCGTGATGC GTGACGGTAA AATCGCATTA
TTCGGAAAAA CGCATGACCT TTCTACCGAC GAGATTATTC AAGCTATCAC CCCGGCAACG
CAGGGCGTCA GTCTTTCCGC GAATCAAAAG TTGTGGCTGG AATTGCCTGG CAGCCGCCCG
CAGAACGAAC GCGGCGCGAC GGTATTAGCG CTGGAGTCAC TGACGGGCGA AGGTTTTATG
AATATCAACC TTGAGGTGCG GGCAGGCGAA ATACTTGGTC TGGCCGGGTT GGTCGGCGCG
GGACGCACAG AACTGGCTGA AACGCTGTAC GGTATTAGAC CGGTCAATGC GGGGCGGATG
CTGTTCAATG GTGAAGAAAT TAACGCCCTG ACAACCCAAC AGCGGTTGCA GCTCGGCCTG
GTCTATTTGC CGGAAGATCG GCAGTCATCC GGGCTGTATC TTGACGCTTC CCTGGCATGG
AATGTCTGTT CGCTGACCCA CAACCAAAAA GGATTTTGGA TAAAGCCCCA GCGGGATAAC
GCCACTCTTG AACGTTACCA CCGCGCGTTA AATATCAAAC TCAATAATGC CGAACAGGCG
GCGCGTACTT TATCCGGCGG TAACCAGCAA AAAGTATTGA TTGCTAAATG CCTGGAAGCC
TCTCCGCAAT TACTGATTGT CGATGAACCG ACCCGCGGTG TCGATGTCTC CGCCCGCAGC
GATATTTATC AGCTGTTGCG CAGTATCGCG CAACAAAATG TCGCAGTGCT GTTTATTTCC
TCCGATCTGG AAGAGATAGA GCAGATGGCC GATCGCGTAT ATGTCATGCA CCAGGGGGAA
CTGGGGGGGC CTGCGTTATG CGGCGAGGAA ATTAACGTTG ATACCATCAT GCACGTTGCG
TTTGGCGAAC ATGGTGCGTC GGAGGCAACA TGTTGA
 
Protein sequence
MQISHNTASP LICVQNIYKS YSGVEVLKGI DFTLHAGEVH ALLGGNGAGK STLMKIIAGI 
VPPDGGTIDI AGVRCSHLTP LKAHQYGIYL VPQEPLLFPS LSVRENILFG LQGRQASTEK
MQQLLKAMGC QLDPASAAGT LDVADRQIVE IMRGLMRDSR ILILDEPTAS LTPAETDRLF
TRLQELLKKG VGIVFISHKL PEIRQLAHCV SVMRDGKIAL FGKTHDLSTD EIIQAITPAT
QGVSLSANQK LWLELPGSRP QNERGATVLA LESLTGEGFM NINLEVRAGE ILGLAGLVGA
GRTELAETLY GIRPVNAGRM LFNGEEINAL TTQQRLQLGL VYLPEDRQSS GLYLDASLAW
NVCSLTHNQK GFWIKPQRDN ATLERYHRAL NIKLNNAEQA ARTLSGGNQQ KVLIAKCLEA
SPQLLIVDEP TRGVDVSARS DIYQLLRSIA QQNVAVLFIS SDLEEIEQMA DRVYVMHQGE
LGGPALCGEE INVDTIMHVA FGEHGASEAT C