Gene SeSA_A4285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4285 
Symbol 
ID6515417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp4156070 
End bp4156792 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID642749244 
Productputative regulatory protein GntR family 
Protein accessionYP_002116991 
Protein GI194736476 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.533887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGTTG ATAAAACGAG CTTTACTCCG CTTTATAAGC AACTATTTTT TATCATCTGT 
CAGCAGATCC AGAACGGGTC TTTGCCTTTA GGCAGCCAGT TGCCGACGCA AAAAGAGGTC 
GCCAGGGCTT ATAACGTTTC GCTGATTGTG GTTAAACAGG CCTGGAGCGA ACTGATCAAT 
GCGGGCATTA TTTCGTCGCA GCGCGGGAGT GGTTCGGTGG TGTGCTCGGT ACCGGAAGGC 
GTGAGCTACG GGCACACGTT TCGCGGTATT ACCCGCGATC TCCAGGACGC CAGCGTGGCG 
ATTGAGAACC GTATTCTGGA AATCGCGCCG CGCCGCGCGC GCGACGCTCA GGCAGACGGC 
TTGAGCCTGC CCGCACAGCA TCACTATCTC TATATTTCGC GTATTCGTTG CCTGAATAAC 
CGTCCATTTA ACCATGAGAA AATTTATCTC GATCTTAGCT TCTTTCCCGA TCTGCAACTC 
ACACCGCAGG CGCTGGAGCA TACGTCGCTT TATTCGTTAT TAAACGTCAC AAGCGACTCG 
GCGATAGAAA AAGTTGAGGC GATTTTACCT TCCGCTGACC TGTGCGAAAA ATTGCAAATC 
GCCGCCAATA AACCGCTGTT ATCCGTCGCC AGGCAGACGT TTCAGGCCGG GAAGGACAGC 
CCTTTTGAGT ATTGCCGCTA TTACGTGCTG TCTGAATACT TTGGTGAAAT TCATTATCAC 
TGA
 
Protein sequence
MQVDKTSFTP LYKQLFFIIC QQIQNGSLPL GSQLPTQKEV ARAYNVSLIV VKQAWSELIN 
AGIISSQRGS GSVVCSVPEG VSYGHTFRGI TRDLQDASVA IENRILEIAP RRARDAQADG 
LSLPAQHHYL YISRIRCLNN RPFNHEKIYL DLSFFPDLQL TPQALEHTSL YSLLNVTSDS 
AIEKVEAILP SADLCEKLQI AANKPLLSVA RQTFQAGKDS PFEYCRYYVL SEYFGEIHYH