Gene SeSA_A4264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4264 
SymbolrhaT 
ID6519604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp4137948 
End bp4138982 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content52% 
IMG OID642749224 
Productrhamnose-proton symporter 
Protein accessionYP_002116971 
Protein GI194736245 
COG category 
COG ID 
TIGRFAM ID[TIGR00776] RhaT L-rhamnose-proton symporter family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.58807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACG CGATTACGAT GGGTATTTTC TGGCATTTGA TAGGGGCGGC CAGTGCAGCC 
TGCTTCTATG CTCCGTTCAA GCAAGTGAAA CAGTGGTCAT GGGAAACCAT GTGGTCAGTG 
GGCGGCATCG TCTCCTGGCT TATTCTGCCG TGGACAATTA GCGCTCTGTT ACTGCCTGAT 
TTCTGGGCCT ATTATGGACA GTTTAACCTC TCCACCCTTT TACCGGTTTT TCTGTTCGGC 
GCCATGTGGG GCATCGGCAA TATTAACTAC GGTCTGACTA TGCGTTATCT CGGGATGTCG 
ATGGGTATCG GCATCGCTAT TGGCATTACG CTTATCGTCG GCACGCTGAT GACGCCTATC 
ATCAACGGTA ACTTCGATGT GTTAATCCAT ACCGAAGGGG GACGCATGAC GCTACTTGGC 
GTTTTTGTCG CGCTGATCGG CGTCGGGATT GTGACGCGCG CCGGACAGTT AAAAGAACGC 
AAAATGGGCA TTAAAGCGGA GGAGTTCAAT CTGAAGAAAG GGCTTCTGCT GGCAGTGATG 
TGCGGTATTT TCTCGGCGGG GATGTCTTTT GCCATGAACG CCGCGAAACC GATGCATGAA 
GCTGCTGCCG CGCTTGGCGT TGACCCGCTC TATGTCGCGC TGCCGAGTTA CGTGGTGATT 
ATGGGCGGCG GCGCGCTGGT TAACCTCGGT TTCTGTTTTA TCCGCCTGGC AAAAGTACAA 
AATCTGTCGA TAAAAGCCGA CTTCTCGCTG GCAAGACCGT TGATTATCAG CAATATTCTG 
CTGTCCGCGC TTGGCGGTCT GATGTGGTAT TTGCAGTTCT TTTTCTATGC CTGGGGTCAC 
GCGCGCATTC CAGCGCAATA TGACTACATG AGCTGGATGC TGCACATGAG CTTCTATGTG 
CTGTGCGGGG GGCTTGTCGG TCTGGTGCTA AAAGAGTGGA AAAATGCTGG CCGCCGTCCC 
GTTGCCGTAT TAAGCCTCGG CTGCGTGGTA ATTATTATCG CGGCGAATAT TGTCGGTTTA 
GGCATGGCCA GTTAA
 
Protein sequence
MSNAITMGIF WHLIGAASAA CFYAPFKQVK QWSWETMWSV GGIVSWLILP WTISALLLPD 
FWAYYGQFNL STLLPVFLFG AMWGIGNINY GLTMRYLGMS MGIGIAIGIT LIVGTLMTPI 
INGNFDVLIH TEGGRMTLLG VFVALIGVGI VTRAGQLKER KMGIKAEEFN LKKGLLLAVM 
CGIFSAGMSF AMNAAKPMHE AAAALGVDPL YVALPSYVVI MGGGALVNLG FCFIRLAKVQ 
NLSIKADFSL ARPLIISNIL LSALGGLMWY LQFFFYAWGH ARIPAQYDYM SWMLHMSFYV 
LCGGLVGLVL KEWKNAGRRP VAVLSLGCVV IIIAANIVGL GMAS