| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4215 |
|---|
| Symbol | hemN |
|---|
| ID | 6517770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 4089508 |
|---|
| End bp | 4090881 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642749177 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_002116924 |
|---|
| Protein GI | 194737499 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.419471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAC AGCAAATAGA CTGGGATCTG GCCCTGATCC AGAAATATAA CTATTCCGGG
CCACGATATA CCTCGTACCC AACCGCGCTG GAGTTTTCTG AAGACTTCGA GGACGCCGCA
TTCTTGCAGG CTGTGGCGCG TTATCCTGAA CGTCCGCTCT CGCTGTATGT GCATATCCCG
TTTTGTCACA AGTTGTGTTA TTTCTGCGGC TGCAACAAGA TTGTCACCCG CCAACAGCAT
AAAGCTGACC AGTATCTTGA CGCGCTTGAG CAGGAAATTC GTCATCGCGC GCCGCTGTTT
GCAGACCGTC ATGTCAGCCA GCTTCACTGG GGCGGCGGTA CGCCTACTTA CCTGAATAAA
GCGCAAATCA GCCGCTTAAT GACGCTGTTG CGTGAAAATT TCCACTTTAA TACCGACGCG
GAAATCTCGA TCGAAGTCGA TCCCCGTGAA ATTGAGCTGG ATGTGCTCGA TCATTTACGT
GCGGAAGGTT TTAACCGCCT GAGTATGGGG GTGCAGGACT TTAATAAAGA GGTGCAGCGC
CTGGTTAACC GCGAGCAGGA TGAAGAATTC ATCTTTGCGC TGCTTAATCA CGCCCGCGAT
ATCGGCTTTA CCTCGACCAA TATCGATTTG ATCTACGGTC TACCGAAACA GACGCCGGAA
AGCTTCGCTT TCACGCTGAA GCGTGTGACG GAACTGAACC CCGATCGTTT GAGCGTCTTT
AACTATGCGC ATCTGCCAAC GCTTTTTGCC GCCCAGCGTA AAATTAAAGA TGCCGATTTA
CCCAGCGCGC AGCAGAAACT GGATATTTTG CAGGAGACGA TCGTATCGCT TACTCAGGCT
GGTTATCAGT TTATCGGGAT GGACCATTTT GCCCGTCCGG ACGACGAACT GGCCGTCGCG
CAGCGCGAAG GCGTGCTGCA CCGTAATTTT CAGGGCTATA CGACCCAGGG CGATACCGAT
CTGCTGGGGA TGGGGGTTTC TGCTATCAGC ATGATTGGCG ATGGCTACAT GCAGAACCAG
AAAGAGCTGA AGCGTTATTA CCAGCAAGTG GATGAGCGGG GCAATGCGCT ATGGCGTGGC
ATTACGCTGA CCCGTGATGA TTGCATTCGT CGCGATGTTA TCAAAGCGCT GATTTGTAAC
TTCCGCCTGG ATTTTAACGC TGTCGAACAG CAGTGGGGTT TGCATTTCGC TGAGTATTTT
GCCGAAGATT TGCAGTTACT GTCGCCGCTG GCGAAAGATG GGCTGGTGGA TATTAGCGAG
AAGGGAATTC AGGTGACGGC GAAAGGTCGT TTGCTGATCC GCAATATCTG CATGTGCTTT
GACGCGTATC TGCGCCAGAA AGCGCGGATG CAGCAGTTCT CGCGCGTCAT TTAG
|
|---|
| Protein sequence | MSEQQIDWDL ALIQKYNYSG PRYTSYPTAL EFSEDFEDAA FLQAVARYPE RPLSLYVHIP
FCHKLCYFCG CNKIVTRQQH KADQYLDALE QEIRHRAPLF ADRHVSQLHW GGGTPTYLNK
AQISRLMTLL RENFHFNTDA EISIEVDPRE IELDVLDHLR AEGFNRLSMG VQDFNKEVQR
LVNREQDEEF IFALLNHARD IGFTSTNIDL IYGLPKQTPE SFAFTLKRVT ELNPDRLSVF
NYAHLPTLFA AQRKIKDADL PSAQQKLDIL QETIVSLTQA GYQFIGMDHF ARPDDELAVA
QREGVLHRNF QGYTTQGDTD LLGMGVSAIS MIGDGYMQNQ KELKRYYQQV DERGNALWRG
ITLTRDDCIR RDVIKALICN FRLDFNAVEQ QWGLHFAEYF AEDLQLLSPL AKDGLVDISE
KGIQVTAKGR LLIRNICMCF DAYLRQKARM QQFSRVI
|
|---|
| |