| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4190 |
|---|
| Symbol | fadB |
|---|
| ID | 6517001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 4067692 |
|---|
| End bp | 4069881 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642749156 |
|---|
| Product | multifunctional fatty acid oxidation complex subunit alpha |
|---|
| Protein accession | YP_002116908 |
|---|
| Protein GI | 194734920 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0458015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTATA AAGGCGACAC CCTGTACCTC GACTGGCTGG AAGATGGCAT CGCCGAACTG
GTGTTCGATG CTCCAGGCTC GGTCAATAAA CTCGACACCG CAACCGTCGC CAGCCTCGGC
CAGGCGCTTG AGGTGCTGGA AAAGCAACAC GATTTAAAAG GGCTGCTGCT GCGCTCGAAT
AAAGCGGCCT TTATTGTCGG CGCGGACATC ACCGAATTTC TTTCACTGTT CCTCGTCCCC
GAAGAGCAGT TAAGCCAATG GCTGCATTTC GCTAATAGCG TCTTTAACCG TCTGGAAGAT
TTACCCGTAC CGACCCTTGC CGCCGTAAAC GGCTATGCGC TGGGCGGCGG GTGCGAATGC
GTGCTGGCCA CCGATTACCG TCTGGCGACG CCAGACCTCC GTATTGGCCT GCCGGAAACT
AAACTGGGCA TCATGCCGGG CTTTGGCGGC TCGGTGCGAA TGCCGCGTAT GCTGGGCGCG
GACAGCGCGC TGGAGATCAT TGCCGCCGGG AAAGATATCG GCGCCGAACA GGCGCTGAAA
ATCGGTCTGG TCGATGGCGT GGTGAAACAA GAGAAGCTGA TCGACGGCGC AATAGCCGTA
TTACGCCAGG CCATTACCGG CGATCTCGAC TGGAGAGCTA AACGCCAGCC GAAACTGGAA
CCGTTGAAAC TCAGTAAGAT TGAAGCGGCG ATGAGCTTTA CCATCGCTAA AGGCATGGTC
GCACAAACGG CGGGTAAACA TTATCCGGCG CCGATGACCG CAGTGAAAAC CATTGAAGCC
GCCGCGCGTT TTGGTCGTGA AGAAGCGCTG AATCTGGAAA ATAAAAGCTT TGTTCCGCTG
GCGCATACCA ATGAGGCTCG TGCGCTGGTC GGTATCTTCC TCAACGATCA ATATGTAAAA
GGTAAAGCCA AAAAGCTGAC CAAAGATATT GAGACGCCGA AACAGGCAGC CGTACTGGGC
GCGGGCATTA TGGGCGGCGG TATCGCTTAC CAGTCGGCCT GGAAAGGCGT ACCGGTTATC
ATGAAAGATA TCAACGATAA ATCGTTGAAC CTCGGCATGA CCGAAGCGGC CAAGCTGCTG
AACAAACAGC TGGAGCGCGG CAAGATCGAC GGTCTGAAGC TGGCGGGCGT CATTTCGACC
ATCCACCCGA CTCTCGATTA TGCCGGTTTC GATCGCGTAG ATGTTGTTGT CGAAGCGGTG
GTCGAAAATC CGAAAGTCAA AAAAGCGGTA CTGGCGGAAA CCGAGCAGAA AGTGCGCCCG
GAAACCGTGC TGGCCTCAAA TACCTCTACC ATCCCAATTC GCGAACTGGC AAGCGCCCTT
GAACGTCCGG AAAACTTTTG CGGAATGCAC TTCTTCAACC CGGTACACCG GATGCCGCTG
GTTGAAATCA TCCGCGGTGA GAAGAGTTCA GACGAAACCA TTGCCAAAGT CGTCGCCTGG
GCAAGCAAAA TGGGCAAGAC GCCGATTGTA GTCAACGACT GCCCCGGCTT CTTTGTTAAC
CGCGTGCTGT TCCCCTATTT CGCCGGTTTC AGTCAACTGC TGCGCGACGG CGCGGATTTC
CGCAAGGTCG ATAAAGTGAT GGAAAAACAG TTCGGCTGGC CGATGGGCCC GGCCTATCTG
CTCGACGTGG TGGGTATTGA TACCGCCCAC CACGCGCAGG CGGTAATGGC GGCAGGCTTC
CCACAACGGA TGCAGAAAGA GTATCGCGAC GCGATCGACG CATTGTTTGA CGCCAGCCGT
TTTGGGCAAA AAAACGGTCT GGGCTTCTGG CGCTATAAAG AAGACAGCAA GGGTAAGCCG
AAGAAAGAAG AAGATGCCGC GGTGGATGAC CTGCTGGCAA GCGTCAGCCA GCCGAAACGC
GACTTCAGCG ACGACGAGAT AATCGCCCGT ATGATGATCC CGATGATTAA CGAAGTGGTT
CGCTGTCTGG AAGAAGGCAT TATCGCAAGC CCGGCGGAAG CCGATATGGC GCTGGTCTAC
GGCCTGGGCT TTCCTCCGTT CCACGGCGGC GCATTCCGCT GGCTGGATAC ACAGGGCAGC
GCGAAATATC TTGATATGGC GCAGCAGTAT CAACACCTCG GCCCGCTGTA TGAGGTGCCG
GAGGGGCTGC GTAATAAAGC GCGCCATAAC GAACCGTATT ATCCCCCGGT TGAACCAGCC
CGTCCGGTTG GTTCTCTGAA AACGGCTTAA
|
|---|
| Protein sequence | MLYKGDTLYL DWLEDGIAEL VFDAPGSVNK LDTATVASLG QALEVLEKQH DLKGLLLRSN
KAAFIVGADI TEFLSLFLVP EEQLSQWLHF ANSVFNRLED LPVPTLAAVN GYALGGGCEC
VLATDYRLAT PDLRIGLPET KLGIMPGFGG SVRMPRMLGA DSALEIIAAG KDIGAEQALK
IGLVDGVVKQ EKLIDGAIAV LRQAITGDLD WRAKRQPKLE PLKLSKIEAA MSFTIAKGMV
AQTAGKHYPA PMTAVKTIEA AARFGREEAL NLENKSFVPL AHTNEARALV GIFLNDQYVK
GKAKKLTKDI ETPKQAAVLG AGIMGGGIAY QSAWKGVPVI MKDINDKSLN LGMTEAAKLL
NKQLERGKID GLKLAGVIST IHPTLDYAGF DRVDVVVEAV VENPKVKKAV LAETEQKVRP
ETVLASNTST IPIRELASAL ERPENFCGMH FFNPVHRMPL VEIIRGEKSS DETIAKVVAW
ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF SQLLRDGADF RKVDKVMEKQ FGWPMGPAYL
LDVVGIDTAH HAQAVMAAGF PQRMQKEYRD AIDALFDASR FGQKNGLGFW RYKEDSKGKP
KKEEDAAVDD LLASVSQPKR DFSDDEIIAR MMIPMINEVV RCLEEGIIAS PAEADMALVY
GLGFPPFHGG AFRWLDTQGS AKYLDMAQQY QHLGPLYEVP EGLRNKARHN EPYYPPVEPA
RPVGSLKTA
|
|---|
| |