Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4186 |
Symbol | ubiD |
ID | 6518184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 4061980 |
End bp | 4063458 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642749152 |
Product | 3-octaprenyl-4-hydroxybenzoate decarboxylase |
Protein accession | YP_002116904 |
Protein GI | 194735887 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0856044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCCA TGAAATATCA CGATTTACGC GACTTCCTGA CGCTACTTGA GCAGCAGGGG GAACTAAAAC GCATCACGCT ACCTGTGGAT CCTCATCTGG AAATCACGGA AATCGCTGAC CGCACGCTGC GTGCCGGTGG ACCGGCGTTG CTGTTTGAAA ATCCTAAAGG TTACGCCATG CCGGTGCTGT GCAACCTTTT TGGCACGCCA AAACGCGTGG CGATGGGCAT GGGGCAGGAT GATGTTTCCG CATTACGGGA AGTGGGTAAA TTATTAGCGT TTCTGAAAGA ACCTGAGCCG CCGAAAGGCT TTCGCGATCT GTTTGACAAG CTGCCGCAGT TTAAGCAAGT GCTGAATATG CCGACGAAAC GGTTACGCGG CGCGCCTTGC CAGCAGAAAA TCGCGTCTGG CGATGATGTC GATTTAACGC GTCTTCCTGT CATGACCTGT TGGCCGGACG ACGCCGCGCC GCTGATTACC TGGGGACTGA CGGTAACGCG TGGTCCGCAC AAAGAGCGGC AAAACCTGGG CATTTATCGT CAGCAGTTGA TAGGTAAAAA TAAGCTGATT ATGCGCTGGC TGTCTCATCG CGGCGGCGCG CTGGATTTTC AGGAGTGGTT AGCCGCGCGT CCGGGTGAAC GTTTCCCGGT CTCCGTCGCA TTGGGCGCCG ATCCGGCGAC GATTCTTGGC GCCGTGACTC CTGTTCCCGA TACTCTGTCG GAGTATGCCT TTGCGGGCTT GCTGCGCGGC ACGAAAACTG AAGTGGTTAA ATGCCTTTCT AACGATCTGG AAGTGCCTGC CAGCGCCGAG ATTATCCTTG AAGGTTACAT TGAGCCGGGA GAGATGGCGC CGGAAGGACC GTATGGCGAT CATACGGGCT ATTATAATGA AGTGGATAAC TTTCCGGTCT TTACCGTCAC GCATATTACG CAGCGTGAGG ATGCCATCTA TCACTCCACC TATACCGGGC GTCCGCCCGA TGAGCCTGCG GTATTAGGGG TGGCGCTCAA TGAAGTCTTC GTGCCTATTC TGCAAAAACA GTTTCCGGAA ATCGTCGACT TTTATCTGCC GCCGGAAGGG TGTTCTTACC GCCTGGCGGT AGTGACGATG AAAAAGCAGT ACGCTGGTCA TGCGAAACGC GTCATGATGG GCGTCTGGTC GTTTTTGCGC CAGTTTATGT ATACGAAATT TGTTATCGTT TGCGATGATG ACGTTAACGC ACGCGACTGG AATGATGTGA TCTGGGCGAT TACCACCCGT ATGGACCCTG CGCGGGATAC GGTGCTGGTT GAAAATACGC CGATTGACTA CCTGGATTTT GCCTCGCCGG TCTCCGGGCT GGGTTCAAAA ATGGGGCTGG ATGCCACAAA CAAATGGCCG GGCGAAACCC AACGCGAGTG GGGTCGTCCT ATTGTTAAAG ATCCTGAAGT TACCGCGCGT ATTGATGCGA TTTGGGATGA GCTGGCTATC TTTAAATAA
|
Protein sequence | MDAMKYHDLR DFLTLLEQQG ELKRITLPVD PHLEITEIAD RTLRAGGPAL LFENPKGYAM PVLCNLFGTP KRVAMGMGQD DVSALREVGK LLAFLKEPEP PKGFRDLFDK LPQFKQVLNM PTKRLRGAPC QQKIASGDDV DLTRLPVMTC WPDDAAPLIT WGLTVTRGPH KERQNLGIYR QQLIGKNKLI MRWLSHRGGA LDFQEWLAAR PGERFPVSVA LGADPATILG AVTPVPDTLS EYAFAGLLRG TKTEVVKCLS NDLEVPASAE IILEGYIEPG EMAPEGPYGD HTGYYNEVDN FPVFTVTHIT QREDAIYHST YTGRPPDEPA VLGVALNEVF VPILQKQFPE IVDFYLPPEG CSYRLAVVTM KKQYAGHAKR VMMGVWSFLR QFMYTKFVIV CDDDVNARDW NDVIWAITTR MDPARDTVLV ENTPIDYLDF ASPVSGLGSK MGLDATNKWP GETQREWGRP IVKDPEVTAR IDAIWDELAI FK
|
| |