Gene SeSA_A4159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4159 
SymbolxerC 
ID6516944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4033029 
End bp4033931 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content56% 
IMG OID642749126 
Productsite-specific tyrosine recombinase XerC 
Protein accessionYP_002116878 
Protein GI194736121 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.937296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATG TCGCGCTTTC TCTGGATGTC TCGCGGTTCC TGCGCTATTT AGGCGTGGAG 
CGCCAGCTTA GCCCCATTAC CCTGCAGAAC TACCAGCGTC AGCTTGATGC CATTATCGCT
TTAGCCGGAG AAACCGGGCT GAAAAGCTGG CAACAATGTG ACGCTGCGAT TGTGCGCAGT
TTTGCGGTGC GCAGTCGGCG TAAAGGGCTT GGCCCTGCCA GTCTGGCGCT ACGTCTCTCG
GCATTGCGAA GCTTTTTTGA CTGGTTAGTC AGTCAGGGCG AATTGAAAGC TAACCCGGCG
AAGGGTGTCT CCGCACCGAA AGCGCCGCGT CATCTGCCGA AAAATATTGA TGTCGACGAC
GTTAACCGCC TGCTGGACAT AGATCTTAAC GATCCGCTCG CCGTACGTGA TCGGGCGATG
CTGGAGGTCA TGTACGGCGC GGGACTGCGT TTATCCGAAC TGGTTGGCCT GGATATAAAG
CACCTCGATC TCGATACCGG CGAAGTGTGG GTAATGGGTA AAGGCAGCAA AGAGCGACGC
CTGCCGATTG GCCGTAACGC GGTGACGTGG ATTGAGCACT GGCTGGATCT GCGCGGACTG
TTCGCCAGCG ATGAAGAGGC GTTATTCCTG TCGAAGCTCG GCAAGCGTAT CTCCGCGCGC
AATGTCCAAA AACGGTTCGC CGAATGGGGC ATAAAGCAGG GGCTAAACAG CCACGTGCAT
CCACATAAGC TGCGCCATTC GTTCGCGACC CATATGCTGG AATCGAGCGG CGATCTGCGC
GGCGTGCAAG AGCTGCTGGG TCATGCCAAC CTTTCCACCA CCCAAATTTA TACTCATCTT
GATTTTCAAC ATCTTGCTTC AGTGTACGAC GCGGCGCATC CGCGCGCTAA ACGGGGGAAA
TAA
 
Protein sequence
MTDVALSLDV SRFLRYLGVE RQLSPITLQN YQRQLDAIIA LAGETGLKSW QQCDAAIVRS 
FAVRSRRKGL GPASLALRLS ALRSFFDWLV SQGELKANPA KGVSAPKAPR HLPKNIDVDD
VNRLLDIDLN DPLAVRDRAM LEVMYGAGLR LSELVGLDIK HLDLDTGEVW VMGKGSKERR
LPIGRNAVTW IEHWLDLRGL FASDEEALFL SKLGKRISAR NVQKRFAEWG IKQGLNSHVH
PHKLRHSFAT HMLESSGDLR GVQELLGHAN LSTTQIYTHL DFQHLASVYD AAHPRAKRGK