Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4159 |
Symbol | xerC |
ID | 6516944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 4033029 |
End bp | 4033931 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642749126 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_002116878 |
Protein GI | 194736121 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.937296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGATG TCGCGCTTTC TCTGGATGTC TCGCGGTTCC TGCGCTATTT AGGCGTGGAG CGCCAGCTTA GCCCCATTAC CCTGCAGAAC TACCAGCGTC AGCTTGATGC CATTATCGCT TTAGCCGGAG AAACCGGGCT GAAAAGCTGG CAACAATGTG ACGCTGCGAT TGTGCGCAGT TTTGCGGTGC GCAGTCGGCG TAAAGGGCTT GGCCCTGCCA GTCTGGCGCT ACGTCTCTCG GCATTGCGAA GCTTTTTTGA CTGGTTAGTC AGTCAGGGCG AATTGAAAGC TAACCCGGCG AAGGGTGTCT CCGCACCGAA AGCGCCGCGT CATCTGCCGA AAAATATTGA TGTCGACGAC GTTAACCGCC TGCTGGACAT AGATCTTAAC GATCCGCTCG CCGTACGTGA TCGGGCGATG CTGGAGGTCA TGTACGGCGC GGGACTGCGT TTATCCGAAC TGGTTGGCCT GGATATAAAG CACCTCGATC TCGATACCGG CGAAGTGTGG GTAATGGGTA AAGGCAGCAA AGAGCGACGC CTGCCGATTG GCCGTAACGC GGTGACGTGG ATTGAGCACT GGCTGGATCT GCGCGGACTG TTCGCCAGCG ATGAAGAGGC GTTATTCCTG TCGAAGCTCG GCAAGCGTAT CTCCGCGCGC AATGTCCAAA AACGGTTCGC CGAATGGGGC ATAAAGCAGG GGCTAAACAG CCACGTGCAT CCACATAAGC TGCGCCATTC GTTCGCGACC CATATGCTGG AATCGAGCGG CGATCTGCGC GGCGTGCAAG AGCTGCTGGG TCATGCCAAC CTTTCCACCA CCCAAATTTA TACTCATCTT GATTTTCAAC ATCTTGCTTC AGTGTACGAC GCGGCGCATC CGCGCGCTAA ACGGGGGAAA TAA
|
Protein sequence | MTDVALSLDV SRFLRYLGVE RQLSPITLQN YQRQLDAIIA LAGETGLKSW QQCDAAIVRS FAVRSRRKGL GPASLALRLS ALRSFFDWLV SQGELKANPA KGVSAPKAPR HLPKNIDVDD VNRLLDIDLN DPLAVRDRAM LEVMYGAGLR LSELVGLDIK HLDLDTGEVW VMGKGSKERR LPIGRNAVTW IEHWLDLRGL FASDEEALFL SKLGKRISAR NVQKRFAEWG IKQGLNSHVH PHKLRHSFAT HMLESSGDLR GVQELLGHAN LSTTQIYTHL DFQHLASVYD AAHPRAKRGK
|
| |