| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4137 |
|---|
| Symbol | |
|---|
| ID | 6519160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 4014112 |
|---|
| End bp | 4015362 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642749105 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_002116861 |
|---|
| Protein GI | 194734150 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.6918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTTG CTAAAGCCTC CCTGTGGACG GCGGTCAGTA CGCTGGTAAA AATTGGCGCC
GGACTGCTGG TGGTGAAACT ACTGGCCGTC TCTTTTGGTC CGGCGGGCGT CGGACAAGCG
GGTAACTTCC GCCAGATGAT CACCGTGCTG GGCGTATTGG CTGGTGCCGG GATATTTAAC
GGCGTTACCA AACTCGTCGC ACAACATCAT GATAACCCGG CGCAGTTACG TACCGTGGTG
GGAACCTCCT CCGCGATGGT ATTGGGTTTC TCTACGCTGC TGGCGCTGGT CTTCCTGCTG
GCGGCGGCGC CGATTAGCCA GGGACTGTTC GGTCATACGG ACTATCAAGG GCTGGTGCGT
CTGGTTGCGC TGGTACAAAT GGGGATCGCC TGGGCGAACC TGCTGCTGGC GCTAATGAAG
GGCTTTCGTG ACGCGTCGGG TAATGCCTTA TCGTTAATTG TCGGCAGCTT TTTGGGCGTC
GTCGCCTGGT ATCTCTGCTA CCGTGTCGGC GGCTATGAAG GCGCTCTGCT TGGCCTGGCG
CTGGTGCCGG CGCTGGTGGT AGTGCCAGCC GGTATGATAC TGATTAAGCG CGGCACCGTC
CCGCTACGCT ATCTCAAGCC CTCCTGGGAC AACGGTCTGG CAGGGCAGCT TAGTAAATTT
ACCCTGATGG CGCTGATTAC CTCCGTTACG ATGCCGGTCG CCTATGTGAT GATGCGAAAC
CAACTGGCCG CGCACTATAG CTGGAGCGAT GTCGGGATCT GGCAGGGCGT GAGCAGTATT
TCTGATGCCT ATCTGCAATT TATCACCGCC TCCTTCAGCG TTTACCTGTT ACCTACGCTC
TCACGCCTGA CGGAAAAACA GGACATTACG CGTGAAGTGG TAAAAGCGCT GAAATTTGTT
TTACCGGCGG TCGCGGCGGC GAGTTTTACC GTCTGGCTAC TGCGCGATTT TGCTATCTGG
CTGCTTTTTT CCGCCAAATT CACCGCGATG CGCGATCTGT TCGCCTGGCA GTTAGTGGGC
GACGTGCTGA AAGTCGGCGC CTATGTTTTC GGTTATCTGG TGATTGCCAA AGCGTCGTTG
CGATTTTACA TTCTGGCCGA AATTAGCCAG TTCATTCTGT TAACGGCGTT CGCTCACTGG
CTGATTCCCG CTCACGGCGC GCTGGGTGCG GCACAGGCTT ATATGGCCAC CTATATTGTC
TATTTTTCAC TTTGTTGCGG CGTATTTTTA CTCTGGCGTA GGCGAGCATG A
|
|---|
| Protein sequence | MSLAKASLWT AVSTLVKIGA GLLVVKLLAV SFGPAGVGQA GNFRQMITVL GVLAGAGIFN
GVTKLVAQHH DNPAQLRTVV GTSSAMVLGF STLLALVFLL AAAPISQGLF GHTDYQGLVR
LVALVQMGIA WANLLLALMK GFRDASGNAL SLIVGSFLGV VAWYLCYRVG GYEGALLGLA
LVPALVVVPA GMILIKRGTV PLRYLKPSWD NGLAGQLSKF TLMALITSVT MPVAYVMMRN
QLAAHYSWSD VGIWQGVSSI SDAYLQFITA SFSVYLLPTL SRLTEKQDIT REVVKALKFV
LPAVAAASFT VWLLRDFAIW LLFSAKFTAM RDLFAWQLVG DVLKVGAYVF GYLVIAKASL
RFYILAEISQ FILLTAFAHW LIPAHGALGA AQAYMATYIV YFSLCCGVFL LWRRRA
|
|---|
| |