| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4115 |
|---|
| Symbol | ilvA |
|---|
| ID | 6519268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 3989876 |
|---|
| End bp | 3991420 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642749083 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_002116839 |
|---|
| Protein GI | 194734502 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAT CTCAACCTCT GTCAGTCGCG CCGGAAGGGG CGGAGTATCT GCGCGCGGTG
CTACGCGCGC CAGTATACGA AGCGGCGCAG GTGACGCCGC TGCAAAAAAT GGAAAAGCTC
TCGTCACGTC TGGATAACGT TATTCTCGTC AAACGCGAAG ACCGGCAGCC GGTACATAGC
TTTAAGCTGC GCGGCGCTTA CGCGATGATG GCCGGATTGA CCGAAGAACA AAAAGCCCAC
GGCGTGATTA CTGCGTCGGC GGGGAATCAT GCACAGGGCG TGGCGTTTTC CTCTGCGCGG
CTTGGCGTGA AGTCGCTGAT CGTCATGCCA AAAGCAACGG CGGATATTAA AGTCGATGCG
GTACGCGGTT TTGGCGGCGA AGTGCTGTTG CACGGCGCTA ATTTTGATGA AGCGAAAGCG
AAAGCTATTG AGCTGGCGCA GCAGCAGGGT TTTACCTGGG TGCCGCCGTT TGATCACCCA
ATGGTGATCG CCGGGCAGGG CACGCTGGCG CTGGAGCTGC TTCAGCAGGA TTCGCATCTC
GATCGTGTCT TTGTGCCGGT TGGTGGTGGC GGCCTGGCTG CTGGCGTAGC GGTACTGATC
AAACAACTGA TGCCGCAAAT CAAAGTGATT GCCATCGAAG CGGAGGATTC CGCCTGCCTG
AAAGCGGCGT TGGAAGCCGG TCATCCAGTG GATCTCCCGC GCGTTGGGTT ATTTGCTGAA
GGCGTGGCGG TAAAACGTAT CGGCGACGAA ACCTTCCGCC TGTGCCAGGA ATATCTCGAC
GATATTATTA CAGTCGATAG CGACGCGATC TGCGCGGCGA TGAAAGATCT GTTTGAAGAT
GTGCGTGCGG TGGCGGAGCC GTCCGGCGCG CTGGCGCTGG CGGGGATGAA AAAATATATC
GCCCAGCACA ATATTCGCGG CGAACGCCTG GCGCACGTCC TTTCCGGCGC CAACGTCAAC
TTCCACGGCT TGCGCTATGT GTCTGAACGC TGCGAGCTGG GGGAACAGCG CGAAGCGTTA
CTGGCGGTGA CCATTCCGGA AGAAAAGGGG AGCTTCCTCA AATTCTGCCA GTTGCTTGGC
GGGCGTATGG TCACTGAATT TAACTACCGT TTTGCCGACG CGAAAAATGC CTGTATTTTT
GTCGGCGTCC GCGTCAGTCA GGGGCTGGAG GAGCGAAAAG AGATTATCAC CCAACTGTGC
GACGGCGGTT ATAGCGTAGT GGATCTCTCC GACGATGAAA TGGCGAAGCT GCATGTGCGC
TATATGGTCG GCGGACGCCC CTCCAAGCCA TTACAGGAGC GTTTGTATAG TTTCGAATTT
CCGGAGTCGC CCGGCGCGTT GCTCAAATTC CTGCATACGC TTGGCACGCA CTGGAATATT
TCGTTATTCC ATTACCGCAG CCACGGTACC GATTATGGCC GCGTGCTGGC GGCGTTCGAG
TTAGGCGATC ATGAGCCGGA TTTCGAAACC CGGCTGCATG AGCTGGGCTA TGAATGCCAT
GATGAGAGCA ATAACCCGGC GTTCCGGTTC TTTCTGGCGG GGTAG
|
|---|
| Protein sequence | MAESQPLSVA PEGAEYLRAV LRAPVYEAAQ VTPLQKMEKL SSRLDNVILV KREDRQPVHS
FKLRGAYAMM AGLTEEQKAH GVITASAGNH AQGVAFSSAR LGVKSLIVMP KATADIKVDA
VRGFGGEVLL HGANFDEAKA KAIELAQQQG FTWVPPFDHP MVIAGQGTLA LELLQQDSHL
DRVFVPVGGG GLAAGVAVLI KQLMPQIKVI AIEAEDSACL KAALEAGHPV DLPRVGLFAE
GVAVKRIGDE TFRLCQEYLD DIITVDSDAI CAAMKDLFED VRAVAEPSGA LALAGMKKYI
AQHNIRGERL AHVLSGANVN FHGLRYVSER CELGEQREAL LAVTIPEEKG SFLKFCQLLG
GRMVTEFNYR FADAKNACIF VGVRVSQGLE ERKEIITQLC DGGYSVVDLS DDEMAKLHVR
YMVGGRPSKP LQERLYSFEF PESPGALLKF LHTLGTHWNI SLFHYRSHGT DYGRVLAAFE
LGDHEPDFET RLHELGYECH DESNNPAFRF FLAG
|
|---|
| |