Gene SeSA_A4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4108 
Symbol 
ID6519970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3981582 
End bp3982418 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content51% 
IMG OID642749076 
Producttranscriptional regulator HdfR 
Protein accessionYP_002116832 
Protein GI194737743 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACGG AATTGTTAAA AACTTTCCTG GAAGTTAGCC GGACACGCCA TTTCGGGCGG 
GCCGCAGAAG CACTTTACCT GACGCAATCC GCGGTGAGCT TTCGTATCAG GCAACTGGAG 
AATCAACTGG GCGTAAACCT TTTTACGCGG CACAGAAACA ATATCCGTTT AACCACGGCT 
GGCGAAAAAC TTTTACCGTA TGCGGAAACG CTGATGAATA CGTGGCAGGC GGCACGTAAA 
GAGGTGGCGC ATACCTCACG CCATAACGAG TTTTCCATCG GCGCCAGCGC GTCTTTATGG 
GAGTGTATGC TTAACGCCTG GCTGGGTCGA CTGTACCAAC TACAGGAGCC GCAAAGCGGC 
CTGCAATTCG AAGCCAGAAT CGCTCAACGG CAATCGCTTG TGAAGCAACT TCATGAACGC 
CAGCTTGATC TCCTCATTAC TACCGAAGCG CCCAAAATGG ATGAGTTCAG CAGTCAGCTG 
TTAGGGCACT TCACTTTGGC GTTATATTGC AGCAGCCCTG CCCGTAAGAA ATCAGAACTC 
AATTATCTGC GGCTGGAGTG GGGACCAGAC TTCCAACAGC ATGAAACAGG GCTGATCGCA 
GCAGATGAAG TGCCGGTATT AACAACCAGC TCAGCCGAAC TCGCCCGACA GCAGCTTAGC 
GCATTAAATG GCTGTAGCTG GCTTCCTGTA AACTGGGTAA ATGAAAAGGG CGGATTACAT 
ACCGTTGCCG ACAGCGCAAC GCTTTCACGG CCGCTATACG CCATTTGGCT GCAAAATAGC 
GATAAATACT CGCTGATCTG CGATCTGTTA AAAACGGATG TGCTGGATGA CCAATGA
 
Protein sequence
MDTELLKTFL EVSRTRHFGR AAEALYLTQS AVSFRIRQLE NQLGVNLFTR HRNNIRLTTA 
GEKLLPYAET LMNTWQAARK EVAHTSRHNE FSIGASASLW ECMLNAWLGR LYQLQEPQSG 
LQFEARIAQR QSLVKQLHER QLDLLITTEA PKMDEFSSQL LGHFTLALYC SSPARKKSEL 
NYLRLEWGPD FQQHETGLIA ADEVPVLTTS SAELARQQLS ALNGCSWLPV NWVNEKGGLH 
TVADSATLSR PLYAIWLQNS DKYSLICDLL KTDVLDDQ