| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4085 |
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| Symbol | gidB |
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| ID | 6515820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 3957183 |
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| End bp | 3957806 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642749054 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_002116816 |
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| Protein GI | 194734008 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0040729 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTCAACA AACTCTCTCG TCTGCTGGCT GATGCCGGTA TTTCTCTTAC CGATCACCAG
AAAACGCTGC TGGTCGCCTA CGTTGATATG CTGCACAAAT GGAACAAAGC ATACAACCTG
ACGTCAGTGC GGGATCCCAA CGAAATGTTG GTACGCCATA TTCTCGACAG CATAGTCGTT
GCGCCGTATC TTCAGGGACA GCGTTTTATC GATGTAGGAA CAGGACCGGG GCTGCCGGGC
ATCCCGCTGG CTATTGTTCT CCCTGACGCG CATTTCACCT TACTCGACAG CCTGGGCAAG
CGGGTACGTT TTCTGCGTCA GGTTCAGCAC GAACTGAAAC TGGAAAACAT CACGCCGGTT
CAAAGCCGCG TTGAAGCCTA TCCTTCCGAA CCGCCGTTTG ATGGCGTTAT CAGCCGCGCT
TTCGCATCGT TGAATGATAT GGTGAGCTGG TGTCACCAGC TGCCGGGAGA GAAAGGGCGT
TTTTATGCCT TAAAAGGGCA TTTGCCAGGG GATGAAATTG CCTCACTACC TGACGATTTT
AGCGTCGAAT CTGTTGAAAA ATTACGGGTT CCGCAACTGG AAGGCGAGCG GCATCTGGTG
ATTATTAAGT CAAACAAAGT TTAA
|
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| Protein sequence | MLNKLSRLLA DAGISLTDHQ KTLLVAYVDM LHKWNKAYNL TSVRDPNEML VRHILDSIVV
APYLQGQRFI DVGTGPGLPG IPLAIVLPDA HFTLLDSLGK RVRFLRQVQH ELKLENITPV
QSRVEAYPSE PPFDGVISRA FASLNDMVSW CHQLPGEKGR FYALKGHLPG DEIASLPDDF
SVESVEKLRV PQLEGERHLV IIKSNKV
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