| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4077 |
|---|
| Symbol | atpA |
|---|
| ID | 6518919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3952445 |
|---|
| End bp | 3953986 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642749046 |
|---|
| Product | F0F1 ATP synthase subunit alpha |
|---|
| Protein accession | YP_002116808 |
|---|
| Protein GI | 194735882 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTGA ATTCCACCGA AATCAGCGAA CTGATCAAGC AGCGCATTGC TCAGTTCAAT
GTGGTGAGCG AAGCTCACAA CGAAGGTACT ATTGTTTCTG TCAGTGACGG TGTTATCCGC
ATTCACGGCC TGGCCGATTG TATGCAGGGT GAAATGATCT CCCTGCCGGG TAACCGTTAC
GCTATTGCAC TGAACCTGGA GCGCGACTCC GTGGGTGCGG TAGTCATGGG TCCATACGCT
GACCTTGCCG AAGGCATGAA GGTTAAATGT ACGGGTCGTA TCCTGGAAGT TCCGGTTGGC
CGCGGCCTGC TGGGACGTGT GGTAAACACC CTGGGTGCGC CAATCGACGG TAAAGGTCCG
GTTGATAATG ACGGCTTCTC TGCCGTTGAA GCGATTGCGC CGGGCGTTAT CGATCGTCAG
TCTGTCGATC AGCCGGTGCA GACCGGCTAT AAAGCCGTTG ACTCCATGAT CCCAATCGGT
CGTGGTCAGC GTGAACTGAT CATCGGTGAC CGTCAGACCG GTAAAACCGC GCTGGCTATC
GACGCCATCA TCAACCAGCG CGATTCCGGC ATTAAATGTA TCTATGTCGC TATCGGCCAG
AAAGCGTCCA CCATCTCTAA CGTGGTGCGC AAACTGGAAG AACACGGCGC GCTGGCTAAC
ACCATTGTTG TGGTGGCGAC CGCGTCCGAA TCCGCTGCGC TGCAATACCT GGCGCCATAT
GCCGGTTGCG CAATGGGCGA ATACTTCCGC GACCGCGGCG AAGATGCGCT GATCATTTAC
GATGACCTGT CTAAACAGGC TGTTGCTTAC CGTCAGATCT CCCTGCTGCT CCGTCGTCCG
CCAGGACGTG AAGCATTCCC GGGCGACGTA TTCTACCTCC ACTCTCGTCT GCTGGAGCGT
GCTGCGCGTG TTAACGCCGA CTACGTCGAA GCCTTCACCA AAGGTGAAGT GAAAGGGAAA
ACCGGCTCTC TGACCGCGCT GCCGATTATC GAAACGCAGG CAGGTGACGT TTCCGCGTTC
GTTCCGACCA ACGTAATTTC CATTACCGAT GGTCAGATCT TTCTGGAATC TAACCTGTTT
AACGCCGGTA TTCGTCCTGC GGTTAACCCG GGTATCTCGG TATCCCGTGT AGGTGGCGCA
GCCCAGACCA AGATCATGAA AAAACTGTCC GGTGGTATTC GTACCGCGCT GGCGCAGTAT
CGTGAACTGG CGGCGTTCTC TCAGTTTGCA TCCGACCTTG ACGATGCCAC CCGTAAACAG
CTTGACCACG GTCAGAAAGT GACCGAACTG CTGAAACAGA AACAGTATGC GCCGATGTCC
GTCGCGCAGC AGTCTCTGGT TCTGTTCGCA GCAGAACGTG GTTATCTGGC GGATGTCGAA
CTGGCGAAAA TCGGTAGCTT CGAAGCCGCA CTGCTGGCTT ACGTCGACCG TGATCACGCT
CCGCTGATGC AAGAGATCAA CCAGTCCGGT GGCTATAACG ACGAAATCGA AGGCAAGCTG
AAAGGCATCC TCGATTCCTT CAAAGCAACC CAGTCCTGGT AA
|
|---|
| Protein sequence | MQLNSTEISE LIKQRIAQFN VVSEAHNEGT IVSVSDGVIR IHGLADCMQG EMISLPGNRY
AIALNLERDS VGAVVMGPYA DLAEGMKVKC TGRILEVPVG RGLLGRVVNT LGAPIDGKGP
VDNDGFSAVE AIAPGVIDRQ SVDQPVQTGY KAVDSMIPIG RGQRELIIGD RQTGKTALAI
DAIINQRDSG IKCIYVAIGQ KASTISNVVR KLEEHGALAN TIVVVATASE SAALQYLAPY
AGCAMGEYFR DRGEDALIIY DDLSKQAVAY RQISLLLRRP PGREAFPGDV FYLHSRLLER
AARVNADYVE AFTKGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLESNLF
NAGIRPAVNP GISVSRVGGA AQTKIMKKLS GGIRTALAQY RELAAFSQFA SDLDDATRKQ
LDHGQKVTEL LKQKQYAPMS VAQQSLVLFA AERGYLADVE LAKIGSFEAA LLAYVDRDHA
PLMQEINQSG GYNDEIEGKL KGILDSFKAT QSW
|
|---|
| |