Gene SeSA_A4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4060 
Symbol 
ID6519691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3933744 
End bp3935081 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content56% 
IMG OID642749029 
Productinner membrane protein YicO 
Protein accessionYP_002116791 
Protein GI194734042 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAC AACACACCAC CCAGGCTTCT GGTCAGGGTA TGCTGGAACG CGTGTTTAAA 
CTGCGCGAAC ATGGCACGAC GGCACGAACC GAAGTGATCG CCGGTTTTAC CACTTTCCTG 
ACGATGGTTT ATATCGTTTT TGTTAACCCG CAAATTCTGG GCGTAGCTGG CATGGACACC 
AGCGCCGTCT TTGTGACCAC CTGTCTGATT GCAGCCTTTG GCAGCATTCT GATGGGCCTG 
TTCGCTAACC TGCCGGTGGC GCTGGCGCCC GCGATGGGGC TGAATGCGTT CTTTGCCTTC 
GTGGTTGTTC AGGCAATGGG ACTGCCGTGG CAGGTAGGCA TGGGCGCCAT TTTCTGGGGC 
GCTGTTGGTC TTTTATTGCT GACTATCTTC CGCGTGCGTT ACTGGATGAT CGCCAACATT 
CCGGTCAGCC TGCGCGTGGG CATCACCAGC GGCATCGGCC TGTTTATTGG CATGATGGGG 
CTGAAAAACG CCGGCGTGAT TGTCGCAAAT CCGGAAACGC TGGTCAGCAT CGGCAACCTG 
ACCTCGCACA GCGTGCTGCT GGGGGTTCTC GGATTCTTTA TTATTGCGAT TCTCGCTTCG 
CGCAACATTC ATGCGGCGGT GCTGGTGTCC ATCATCGTCA CGACGCTGCT TGGCTGGATG 
ATGGGCGATG TACACTACAA CGGCATTGTC TCCGCGCCGC CAAGCGTCAC CAGCGTGGTA 
GGGCATGTCG ATTTGGCAGG CTCGTTCAAT CTTGGCCTGG CGGGGGTTAT TTTCTCCTTC 
ATGCTGGTAA ACCTGTTTGA CTCCTCCGGT ACGCTGATTG GCGTGACCGA TAAAGCCGGC 
CTGGCGGATG AGAAAGGCAA ATTCCCGCGC ATGAAGCAGG CACTGTTTGT TGATAGTATC 
TCTTCCGTCA CTGGCGCATT TGTCGGAACG TCTTCTGTGA CCGCTTATAT TGAATCGTCT 
TCCGGCGTTT CGGTGGGCGG TCGCACCGGT TTGACGGCGG TGGTGGTCGG TATTTTGTTC 
CTGCTGGTTA TCTTCCTGTC GCCGCTGGCG GGCATGGTGC CGCCTTACGC GGCGGCGGGC 
GCGCTGATTT ACGTCGGCGT GCTGATGACC TCCAGCCTGG CGCGGGTAAA CTGGCAGGAT 
TTAACCGAAT CGGTCCCGGC GTTTATTACG GCGGTAATGA TGCCGTTTAG CTTCTCGATC 
ACCGAAGGTA TCGCGCTGGG CTTTATCTCT TACTGCGTGA TGAAAATCGG GACAGGCCGC 
CTACGCGACC TTAGCCCGTG CGTAGTGATT GTCGCGCTGT TATTCGTGCT GAAGATTGTG 
TTTATTGACG CACACTGA
 
Protein sequence
MSQQHTTQAS GQGMLERVFK LREHGTTART EVIAGFTTFL TMVYIVFVNP QILGVAGMDT 
SAVFVTTCLI AAFGSILMGL FANLPVALAP AMGLNAFFAF VVVQAMGLPW QVGMGAIFWG 
AVGLLLLTIF RVRYWMIANI PVSLRVGITS GIGLFIGMMG LKNAGVIVAN PETLVSIGNL 
TSHSVLLGVL GFFIIAILAS RNIHAAVLVS IIVTTLLGWM MGDVHYNGIV SAPPSVTSVV 
GHVDLAGSFN LGLAGVIFSF MLVNLFDSSG TLIGVTDKAG LADEKGKFPR MKQALFVDSI 
SSVTGAFVGT SSVTAYIESS SGVSVGGRTG LTAVVVGILF LLVIFLSPLA GMVPPYAAAG 
ALIYVGVLMT SSLARVNWQD LTESVPAFIT AVMMPFSFSI TEGIALGFIS YCVMKIGTGR 
LRDLSPCVVI VALLFVLKIV FIDAH