| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4048 |
|---|
| Symbol | recF |
|---|
| ID | 6518520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3921626 |
|---|
| End bp | 3922699 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642749018 |
|---|
| Product | recombination protein F |
|---|
| Protein accession | YP_002116780 |
|---|
| Protein GI | 194737823 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.331316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGA CGCGCCTTTT AATCAAAGAC TTCCGCAACA TAGAAAATGC GGATCTCGCT
TTATCCCCCG GCTTTAACTT CCTGGTTGGC GCCAACGGCA GCGGCAAAAC CAGCGTGCTG
GAAGCTATCT ATACGCTTGG CCACGGTCGG GCGTTTCGCA GTTTGCAGCC TGGCCGCGTG
ATTCGTCATG AGCAGGAAGC GTTTGTTCTC CACGGGCGAT TACAGGGCGA AGAGCGTGAG
ACGTCGATTG GCTTAACCAA AGATAAGCAG GGCGACAGCA AAGTCCGTAT CGACGGTACC
GACGGTCACA AGATCGCGGA GCTGGCGCAT TTAATGCCGA TGCAGTTGAT TACGCCGGAG
GGGTTTACTT TACTCAACGG CGGCCCCAAA TACAGAAGAG CGTTCCTTGA CTGGGGATGC
TTTCACAACG AAGCCGGATT CTTCACCGCC TGGAGTAACC TGAAACGATT GCTGAAACAG
CGTAATGCTG CGCTGCGCCA GGTGAGTCGT TATGAGCAAT TGCGCCCGTG GGATAAAGAG
CTGATCCCGT TGGCGGAACA AATTAGTACC TGGCGGGCGG AGTACAGCAT CGCTATCGCA
CAGGACATGG CGGATACCTG TCAGCAGTTT TTACCTGAAT TTTCCCTGAC GTTCTCTTTC
CAGCGCGGCT GGGAGAAAGA GACAGACTAT GCGGACGTGC TGGAGCGAAG CTTTGAGCGT
GACCGTATGT TGACCTACAC CGCGCACGGG CCGCATAAAG CGGACTTTCG CATTCGCGCT
GACGGCGCGC CGGTGGAAGA TACCCTGTCG CGCGGGCAGC TAAAGTTATT GATGTGCGCC
TTACGTCTGG CGCAGGGCGA GTTCCTCACC CGCGAAAGCG GGCGGCGCTG CCTGTACCTG
ATAGATGATT TTGCCTCTGA ACTTGACGAT GCGCGTCGCG GACTGCTGGC CAGCCGCTTA
AAAGCCACGC AATCGCAGGT CTTTGTCAGC GTAATTAGCG CTGAACACGT TATAGACATG
TCGGATGAAA ATTCGAAGAT GTTTACCGTG GAAAAGGGTA AAATAACGGA TTAA
|
|---|
| Protein sequence | MSLTRLLIKD FRNIENADLA LSPGFNFLVG ANGSGKTSVL EAIYTLGHGR AFRSLQPGRV
IRHEQEAFVL HGRLQGEERE TSIGLTKDKQ GDSKVRIDGT DGHKIAELAH LMPMQLITPE
GFTLLNGGPK YRRAFLDWGC FHNEAGFFTA WSNLKRLLKQ RNAALRQVSR YEQLRPWDKE
LIPLAEQIST WRAEYSIAIA QDMADTCQQF LPEFSLTFSF QRGWEKETDY ADVLERSFER
DRMLTYTAHG PHKADFRIRA DGAPVEDTLS RGQLKLLMCA LRLAQGEFLT RESGRRCLYL
IDDFASELDD ARRGLLASRL KATQSQVFVS VISAEHVIDM SDENSKMFTV EKGKITD
|
|---|
| |