Gene SeSA_A4046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4046 
Symbol 
ID6517909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3918268 
End bp3919164 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content54% 
IMG OID642749016 
Productputative transcriptional regulator 
Protein accessionYP_002116778 
Protein GI194735080 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAA CTATCCGGCA ATTTCGCGCG TTTCTGGCCG TCGCGGATTT GCGTAGTTTT 
ACCGCCGCCA GCAAATATCT GTGCATCACG CAGGGCGCCG TTAGCGGTTT AATCAACGAA 
ATGGAAAGCC AGATGGAGGT TTCCCTTTTC GACCGCACTT CGCACGTGGT GAAGCTGTCG 
CCCGACGGCG AAAAATTTTT GCCCTCCGCT ATGCGGGTGG TTGAAGAGTT TCAACGGGCC 
GAAAATTATG CCCGCGACCT GAAAGAGATC AAAAAATCCC TGGTGCGGGT TGTTGGCGCG 
CCGCTGATCG CCTGTGCCTT TTTGCCGAAA ATTATCCATG CCTTTAAGCG GCAGCACCCG 
CATACCCATG TACAGCTTAT TGATAAGCCC ATGTCGCAAT TACAAAAAAG CATTATGTTG 
GGAGAAGCGG ATTTCGGTAT CGGCCCTGAG CGACCGCTGG AACCGGAAAT CGACAAACAA 
ACGCTGTTCA CAACGGAAAT CGCCCTGTAC TGCCATCCGG ACTATCGGCT GCATAAAAAA 
ACGGTTCGCT GGGAAGAGAT TCAGAGCGAA GAGCTGATCG CCGTTGGCAA CGAATCCATT 
CCGACGATCT CCGCGACCGC TGGCGTGCGC ATTAAGCCCA AAATGACGGT GGAACATATG 
GCGACCGCCA TGTCGCTGGC GGCGCAGTGT GAAGGCGTGG TGATCGCCGG AACCTTTTCC 
CGCCATTACG CCAAAAGCTA CCAATTAGCG ACCTGTTCGC TCACGCCTCC GCTGCGGCGC 
AATATGAACC TTTATTTCCA TGCGTGGCGC GCACAAACGC CCGCCACGCA GCGCTTTAGA 
GATTTTTTAT TTAGCTATGT CGATGAACAT CATGATGCCC CGGCCAACCA GCGGTAG
 
Protein sequence
MNLTIRQFRA FLAVADLRSF TAASKYLCIT QGAVSGLINE MESQMEVSLF DRTSHVVKLS 
PDGEKFLPSA MRVVEEFQRA ENYARDLKEI KKSLVRVVGA PLIACAFLPK IIHAFKRQHP 
HTHVQLIDKP MSQLQKSIML GEADFGIGPE RPLEPEIDKQ TLFTTEIALY CHPDYRLHKK 
TVRWEEIQSE ELIAVGNESI PTISATAGVR IKPKMTVEHM ATAMSLAAQC EGVVIAGTFS 
RHYAKSYQLA TCSLTPPLRR NMNLYFHAWR AQTPATQRFR DFLFSYVDEH HDAPANQR