Gene SeSA_A4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4002 
SymbolfucP 
ID6519091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3874035 
End bp3875351 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content52% 
IMG OID642748973 
ProductL-fucose:H+ symporter permease 
Protein accessionYP_002116735 
Protein GI194735578 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID[TIGR00885] L-fucose:H+ symporter permease 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.225731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATA AAAACATCGT TCAGATGCCC GACGGGTATC TGAATAAGAC ACCTCTGTTC 
CAGTTTATTT TGTTATCCTG TTTATTCCCA TTATGGGGAT GCGCAGCCGC GTTAAATGAT
ATTCTGATTA CGCAATTTAA AAGTGTATTT TCGCTGAGCA ACTTTGCTTC GGCATTAGTA
CAAAGCGCCT TTTATGGCGG TTATTTTTTA ATTGCTATTC CGGCCTCGCT GGTCATTAAA
AAAACCAGTT ATAAAGTGGC GATACTTATC GGCCTGACGC TATACATTGT CGGCTGTACG
CTCTTTTTTC CGGCGTCGCA CATGGCGACC TACACCATGT TCCTCGCGGC GATTTTTGCC
ATTGCGATTG GCCTGAGTTT CCTGGAAACG GCGGCGAACA CCTACAGTTC GATGATCGGG
CCGAAAGCCT ACGCCACGCT GCGGCTGAAT ATCAGCCAGA CCTTTTATCC GATCGGCGCG
GCGGCAGGCA TTTTATTGGG TAAGTATCTG GTCTTTTCCG AAGGGGAAAG CCTGGAAAAA
CAGATGGCGG GCATGAATGC CGAGCAAGTC CACAACTTCA AGGTGCTGAT GCTGGAAAAC
ACTCTGGAAC CCTATAAGTA CATGATTATG GTCCTGGTAG TGGTGATGGT ACTGTTCCTG
CTGACGCGTT TCCCGACCTG TAAAGTCGCG CAAACCGCGA GTCATAAACG CCCCTCGGCG
CTGGATACGT TACGCTATCT CGCCAGCAAC GCCCGTTTCC GTCGCGGTAT TGTGGCGCAG
TTCCTGTATG TGGGAATGCA GGTGGCGGTC TGGTCGTTCA CTATCCGTCT GGCGCTGGAG
TTAGGCGATA TCAATGAGCG CGATGCCTCA ACCTTTATGG TCTACAGCTT CGCCTGCTTT
TTTATCGGCA AGTTTATCGC CAACATTCTG ATGACACGCT TTAACCCGGA AAAAGTCCTG
ATCCTTTACT CTGTGATCGG CGCGCTGTTC CTGGCCTACG TGGCGCTGGC GCCCAGCTTT
AGCGCGGTAT ACGTGGCGGT GCTGGTCAGC GTTCTGTTTG GCCCCTGCTG GGCGACCATT
TATGCCGGAA CGCTCGATAC CGTCGATAAC GAGCATACCG AAATGGCGGG GGCGGTGATC
GTGATGGCGA TTGTCGGCGC GGCGGTGGTT CCCGCGATTC AGGGCTACGT GGCGGACATG
TTCCACTCGT TACAGCTCTC ATTCCTGGTT TCCATGCTGT GCTTTGTTTA CGTTGGCGTT
TACTTCTGGC GCGAAAGCAA AGTGCGCGGC AACCTGGCTG AAGTCGCCGC GTCCTGA
 
Protein sequence
MNDKNIVQMP DGYLNKTPLF QFILLSCLFP LWGCAAALND ILITQFKSVF SLSNFASALV 
QSAFYGGYFL IAIPASLVIK KTSYKVAILI GLTLYIVGCT LFFPASHMAT YTMFLAAIFA
IAIGLSFLET AANTYSSMIG PKAYATLRLN ISQTFYPIGA AAGILLGKYL VFSEGESLEK
QMAGMNAEQV HNFKVLMLEN TLEPYKYMIM VLVVVMVLFL LTRFPTCKVA QTASHKRPSA
LDTLRYLASN ARFRRGIVAQ FLYVGMQVAV WSFTIRLALE LGDINERDAS TFMVYSFACF
FIGKFIANIL MTRFNPEKVL ILYSVIGALF LAYVALAPSF SAVYVAVLVS VLFGPCWATI
YAGTLDTVDN EHTEMAGAVI VMAIVGAAVV PAIQGYVADM FHSLQLSFLV SMLCFVYVGV
YFWRESKVRG NLAEVAAS