| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3999 |
|---|
| Symbol | uhpB |
|---|
| ID | 6518837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3870764 |
|---|
| End bp | 3872266 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642748970 |
|---|
| Product | sensory histidine kinase UhpB |
|---|
| Protein accession | YP_002116732 |
|---|
| Protein GI | 194734624 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3851] Signal transduction histidine kinase, glucose-6-phosphate specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCT TTTTTTCCCG TTTAATCACC GTTGTTGCCT GTTTTTTTAT TTTCTCCGCC
GCGTGGTTCT GCCTGTGGAG CATCAGCCTG CATCTGGTAG AGCGCCCGGA GCTGGCGGCG
CTGCTCTTTC CCTTCGGCCT GCGCCTGGGA CTTATGCTGC AATGTCCGCG CGGATACTGG
CCAGTATTGC TGGGCGCGGA GTGGCTGCTG GTGTACTGGT TAGCGCAGGA AGTTGCGCTG
GCCCATCTGC CGCTTTTGAT GATCGGTAGT GTGTTGACGC TACTGCCCGT GGCGCTGACT
TCGCGTTACC GCCATCAGCG CGACTGGCGC ACGTTATTGC TTCAGGGCGC GGCCCTCACC
GCCGCGGCGC TACTGCAATC CCTGCCCTGG TTGGGGCAGG GGGAAGCGGC ATGGAACGCG
CTACTGCTGA CCCTCACGGG TGGTCTGACG CTGGCCCCCA TCTGCCTGGT TTTCTGGCAC
TATCTCACCA GCACTACCTG GCTGCCGCTG GGACCATCGC TGGTATCGCA GCCGGTAAAC
TGGCGCGGGC GGCATCTGAT CTGGTATCTG CTGCTGTTTA TCGTCAGTCT GTGGCTGCAA
CTGGGTTTAC CTGCTGAACT TTCGCGCTTC ACGCCGTTCT GCCTGGCATT GCCGATTATC
GCGCTCGCCT GGCATTATGG CTGGCAGGGC GCGCTCATTG CCACGCTGAT GAATGCTATC
GCGCTGATCG CCAGCCAGAC CTGGCACGAT CATCCCGTCG ATTTATTACT TTCGCTGTTG
GTGCAAAGCC TGACCGGGCT ACTGCTTGGC GCTGGCATTC AGCGTCTGCG CGAGCTGAAC
CAGTCGTTGC AAAAGGAGCT GGCGCGCAAC CATCGGCTGG CGGAGCGTCT TCTGGAGACC
GAAGAGAGCG TGCGGCGCGA TGTTGCGCGT GAGCTGCACG ATGACATCGG GCAGACCATC
ACCGCGATTC GAACCCAGGC GGGCATTGTG CAACGACTGG CGGCGGATAA CGGCGGCGTG
AAGCAGAGCG GGCAACTTAT CGAGCAGCTT TCGCTGGGCG TGTATGACGC CGTGCGTCGC
CTGCTGGGGC GCTTGCGCCC GCGCCAGCTA GACGACTTAA CGCTGGCGCA GGCCATCCGT
TCGCTGCTGC GCGAAATGGA GCTGGAAAGC CGCGGTATTG TCAGTCACCT CGACTGGCGA
ATTGACGAAA CGGCGCTGAG TGAAAGTCAG CGCGTGACGC TGTTTCGCGT CTGTCAGGAA
GGGCTGAATA ACATCGTAAA ACATGCCAAT GCCAGCGCGG TGACGCTCCA GGGCTGGCAG
CAGGATGAGC GGCTGATGTT GGTGATTGAG GATGACGGCA GCGGCCTGCC GCCGGGCTCT
CAGCAGCAGG GCTTCGGCCT GACCGGAATG CGCGAACGCG TGTCGGCGCT CGGCGGGACG
CTAACCATCT CTTGTACCCA CGGTACGCGG GTGAGCGTCT CGTTGCCCCA GCGTTACGTT
TAA
|
|---|
| Protein sequence | MNTFFSRLIT VVACFFIFSA AWFCLWSISL HLVERPELAA LLFPFGLRLG LMLQCPRGYW
PVLLGAEWLL VYWLAQEVAL AHLPLLMIGS VLTLLPVALT SRYRHQRDWR TLLLQGAALT
AAALLQSLPW LGQGEAAWNA LLLTLTGGLT LAPICLVFWH YLTSTTWLPL GPSLVSQPVN
WRGRHLIWYL LLFIVSLWLQ LGLPAELSRF TPFCLALPII ALAWHYGWQG ALIATLMNAI
ALIASQTWHD HPVDLLLSLL VQSLTGLLLG AGIQRLRELN QSLQKELARN HRLAERLLET
EESVRRDVAR ELHDDIGQTI TAIRTQAGIV QRLAADNGGV KQSGQLIEQL SLGVYDAVRR
LLGRLRPRQL DDLTLAQAIR SLLREMELES RGIVSHLDWR IDETALSESQ RVTLFRVCQE
GLNNIVKHAN ASAVTLQGWQ QDERLMLVIE DDGSGLPPGS QQQGFGLTGM RERVSALGGT
LTISCTHGTR VSVSLPQRYV
|
|---|
| |