| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3994 |
|---|
| Symbol | |
|---|
| ID | 6517830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3865660 |
|---|
| End bp | 3866133 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642748965 |
|---|
| Product | putative phosphotransferase system mannitol/fructose-specific IIA domain |
|---|
| Protein accession | YP_002116727 |
|---|
| Protein GI | 194737957 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.489093 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGATA TTCATTTTCG CCGTTATTAT GTTCGCCACC TCCCTAAAGA GGTGAGTCAG
AATGACATAA TCAAGGCTCT TGCCAGTCCG TTAATTAACG ATGGTATGGT TGTATCTGAT
TTTGCCGATC ACGTCATTAC GCGAGAACAG AATTTTCCAA CGGGTCTACC GGTTGAGCCT
GTAGGTGTCG CTATTCCACA TACTGATCAC AGGTATGTTC GCCAAAACGC CATTAGCGTT
GGAATACTGG CAGAACCCGT CAATTTCGAA GATATGGGCG GGGAACCAGA TCCCGTACCT
GTCAGGGTGG TGTTTATGCT TGCTTTAGGT GAAAGCAATA AGCAGCTCAA CGTACTGGGT
TGGATTATGG ATGTGATCCA GGATGAGGAT TTTATGCAGC AGTTACTGGT CATGAATGAT
GATGAAATTT ATCAGTCAAT TTACACACGC ATATCTGAAA GAGGTGAAGT ATGA
|
|---|
| Protein sequence | MQDIHFRRYY VRHLPKEVSQ NDIIKALASP LINDGMVVSD FADHVITREQ NFPTGLPVEP
VGVAIPHTDH RYVRQNAISV GILAEPVNFE DMGGEPDPVP VRVVFMLALG ESNKQLNVLG
WIMDVIQDED FMQQLLVMND DEIYQSIYTR ISERGEV
|
|---|
| |