Gene SeSA_A3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3979 
Symbol 
ID6518162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3852392 
End bp3852817 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content59% 
IMG OID642748951 
ProductPTS system fructose IIA component 
Protein accessionYP_002116713 
Protein GI194737215 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTACCA CACAACCGTT GCCCCACATC CTGCTGCTGA CGCATGGCGG CTGGGGACAA 
CCGCTTTGCA ACAGCCTGCG TATGGTCACG GGCGAAATTA AAGGCGTGAC GGAAATCGCG
CTAATGCCTG TCGATACGCT GGGCGAGTTT TATCAACGCG TCGAGGCCGT GGTGAAAACG
CTGCCGGAGG GCTCGCTGAT CCTGACAGAT TTTGTCGGCG GCACGACGTC CAACGTCGCG
GCGCGACTAA GCGCCGATTA TCCGGTGGCG GTGATTGCCG GACTGAATGC GTCGCTACTG
CTGGAGGCGC TGGACAGGCG CGAACAAGGG ATGCTAACCG CCTGCGTGGA TGAGTTAGTT
GAGGCCGGGC GCAGTAGCTG CCTGGATGTG GTCGCCCATG TACGTCAGCT ACAACAATCA
CTCTAA
 
Protein sequence
MTTTQPLPHI LLLTHGGWGQ PLCNSLRMVT GEIKGVTEIA LMPVDTLGEF YQRVEAVVKT 
LPEGSLILTD FVGGTTSNVA ARLSADYPVA VIAGLNASLL LEALDRREQG MLTACVDELV
EAGRSSCLDV VAHVRQLQQS L