Gene SeSA_A3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3978 
Symbol 
ID6517035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3851896 
End bp3852381 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content52% 
IMG OID642748950 
ProductPTS system sorbose subfamily IIB component 
Protein accessionYP_002116712 
Protein GI194736727 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATA TCGTTTTATG CCGCATCGAC AGCCGTCTCA TTCATGGGCA GGTTGTCACG 
AAGTGGGTCG GACAATCTCA GGCGAACCGG ATAGCCGTTG TGAGTGATGA ACTGGATGCC
GATCCGTTTA TGAAAAATAT CTACCTGATG GCCGCGCCGC CAAATATCAA AGTGGATTGC
TTCGGCAACC AGAGTTTTGC CGCCGCATGG AAAGAAAATC AGCTTGGCGA CGGTAACGTG
CTGGTGCTTT TTCCCTCACT GGCGGCGGTG CAGAACGCCA TACAACTGGG CTTTGACGTT
ACCCGCATTC AGGTTGGCGG TCTCGGCGGC GGGCCAAACC GCAAGGCGGT TTTTCAGAAT
ATTACGCTGG ATGAAAAAGA CGTCGGCATT CTTAACGACC TGAAAAACCG TGGCGTTCAG
GTATTTTTCC AGACCATCCC GGAAGATAAG CCGCAGCCGC TCGACGATAT CCTGAAAAAA
TTCTAA
 
Protein sequence
MANIVLCRID SRLIHGQVVT KWVGQSQANR IAVVSDELDA DPFMKNIYLM AAPPNIKVDC 
FGNQSFAAAW KENQLGDGNV LVLFPSLAAV QNAIQLGFDV TRIQVGGLGG GPNRKAVFQN
ITLDEKDVGI LNDLKNRGVQ VFFQTIPEDK PQPLDDILKK F