Gene SeSA_A3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3956 
Symbol 
ID6519313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3828917 
End bp3831235 
Gene Length2319 bp 
Protein Length772 aa 
Translation table11 
GC content56% 
IMG OID642748928 
Productalpha-xylosidase YicI 
Protein accessionYP_002116691 
Protein GI194737559 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA GCGACGGAAA CTGGCTGATC CAGCCTGGCC TTAATTTGAT TCACCCGGTT 
CAGGTGTTCG ACGTTGAACA GCAGGGGAAT GAGATGGTGG TCTATGCCGC GCCGCGCGAT
GTCCGCGAAC GAACCTGGCA ACTGGATACC CCGTTGTTTA CCTTGCGCTT TTTCTCGCCG
CAGGAAGGAG TGATAGGTGT ACGGATGGAA CACTTCCAGG GCGCTTTGGA TAACGGCCCA
CATTATCCAC TCAATGTCTT GCAAGATATC AACGTAGAGA TGCAGAACAA CGCCGAATTT
GCCGAACTCA AGAGCGGCAG CCTGAGCGTG CGCGTCACCA AAGGCGAGCT CTGGTCCCTG
GATTTTCTGC GCAACGGTGT ACGTATCACC GGTAGCCAGT TGAAAAATAA CGGCTATGTA
CAGGACACCA ACAGCGGGCG CAACTACATG TTCGAGCGCC TGGATCTCGG CGTGGGCGAA
ACCGTCTACG GGCTGGGCGA GCGCTTTACC GCGCTGGTGC GTAACGGTCA GACGGTGGAG
ACCTGGAACC GCGACGGCGG CACCAGCACC GAGCAGTCTT ACAAGAACAT CCCGTTCTAT
ATCACCAACC GTGGCTACGG TGTGCTGGTA AACCATCCGC AGTGCGTGTC GTTTGAAATT
GGCTCCGAGA AAGTCTCCAA AGTCCAGTTC AGCGTTGAGA GCGAGTATCT GGAATACTTC
GTCATCGACG GCCCGACCCC GAAAGACGTG CTGAACCGCT ATACCCAATT TACGGGTCGT
CCGGCGCTGC CGCCCGCCTG GTCGTTTGGC CTGTGGCTGA CCACCTCATT TACCACCAAC
TACGACGAAG CGACCGTTAA CAGCTTTATC GACGGTATGG CCGAGCGCAA TCTACCGCTG
CACGTCTTCC ACTTCGACTG TTTCTGGATG AAAGCTTTTC AGTGGTGCGA TTTTGATTGG
GACCCGGTGA CTTTCCCCGA TCCGAAAGGG ATGATTCGCC GCCTGAAAGC GAAAGGGCTG
AAAGTCTGCG TGTGGATTAA CCCCTACATC GGCCAGAAAT CCCCGGTCTT CCAGGAGCTA
AAAGAGAAAG GGTATTTGCT TAAACGCCCG GACGGCTCCT TGTGGCAGTG GGATAAATGG
CAGCCGGGAC TGGCGATTTA CGACTTCACC AACCCGCAAG CCTGCGAATG GTATGCCGAC
AAGCTGAAGG GCCTGGTGGA GATGGGAGTG GACTGCTTCA AAACTGACTT CGGCGAACGC
ATTCCAACGG ATGTGCAGTG GTTTGATGGT TCAGATCCAC AGAAAATGCA TAACCATTAT
GCCTATATCT ACAACGAACT GGTGTGGAAC GTGCTGAAAG AGACCGTCGG CGTTGAAGAG
GCGGTGCTGT TCGCCCGTTC CGCCTCGGTG GGCGCGCAAC AGTTCCCGGT GCACTGGGGC
GGCGACTGTT ACGCCAACTA CGAATCGATG GCGGAAAGCC TGCGCGGCGG GCTGTCCATT
GGCCTGTCAG GATTTGGCTT CTGGAGCCAT GATATTGGCG GATTCGAGAA TACCGCGCCG
GCGCATGTCT ACAAGCGTTG GTGCGCATTC GGCTTGCTCT CCAGCCACAG CCGCCTGCAC
GGTAGCAAAT CCTACCGGGT TCCGTGGGCC TATGACGACG AGTCCTGTGA CGTGGTGCGC
TTCTTCACCG AACAGAAGTG CCGGATGATG CCGTATCTGT ATCGGGAAGC GGCGCGCGCC
AACGAAGCCG GTACGCCAAT GATGCGGGCG ATGATGCTGG AGTTCCCGGA CGATCCGGCG
TGTGATTATC TTGATCGCCA GTACATGCTG GGAGATGCGG TCATGGTAGC GCCGGTATTT
AGTGAAGCGG GCGACGTGGA GTTCTATCTG CCAGAAGGCC GCTGGACGCA CCTGTGGCGC
AACGATGAAG TGCAGGGCAG CCGCTGGCAT AAACAGCAGC ATGACTTCCT GAGCCTGCCA
GTGTACGTGC GTGACAATAC ACTACTGGCG CTGGGCAACA ATAGCCAGAA GCCCGATTAC
GCCTGGCATG AGGGTACGGC CTTCCAGTTA TTCCATCTGG ATGACGGCTG CGAAGCGGTC
TGCGAAGTCC CTGCTACGGA TGGTTCGACA ATCTTTACGC TGCAGGCGAA ACGCACAGGC
AATACCATTA CGGTGAGCGG CGAAGGCGAG GCGCGCAACT GGACGCTGTG TCTGCGTAAT
ATTACGCAGA TTAGCGGTAC CAAATGCGGC TCATATGCGG GAAGTGAACT GGGCGTAGTG
GTTACCCCGC TGGGAAATGA AGTGGTGATT ACGCTTTAA
 
Protein sequence
MKISDGNWLI QPGLNLIHPV QVFDVEQQGN EMVVYAAPRD VRERTWQLDT PLFTLRFFSP 
QEGVIGVRME HFQGALDNGP HYPLNVLQDI NVEMQNNAEF AELKSGSLSV RVTKGELWSL
DFLRNGVRIT GSQLKNNGYV QDTNSGRNYM FERLDLGVGE TVYGLGERFT ALVRNGQTVE
TWNRDGGTST EQSYKNIPFY ITNRGYGVLV NHPQCVSFEI GSEKVSKVQF SVESEYLEYF
VIDGPTPKDV LNRYTQFTGR PALPPAWSFG LWLTTSFTTN YDEATVNSFI DGMAERNLPL
HVFHFDCFWM KAFQWCDFDW DPVTFPDPKG MIRRLKAKGL KVCVWINPYI GQKSPVFQEL
KEKGYLLKRP DGSLWQWDKW QPGLAIYDFT NPQACEWYAD KLKGLVEMGV DCFKTDFGER
IPTDVQWFDG SDPQKMHNHY AYIYNELVWN VLKETVGVEE AVLFARSASV GAQQFPVHWG
GDCYANYESM AESLRGGLSI GLSGFGFWSH DIGGFENTAP AHVYKRWCAF GLLSSHSRLH
GSKSYRVPWA YDDESCDVVR FFTEQKCRMM PYLYREAARA NEAGTPMMRA MMLEFPDDPA
CDYLDRQYML GDAVMVAPVF SEAGDVEFYL PEGRWTHLWR NDEVQGSRWH KQQHDFLSLP
VYVRDNTLLA LGNNSQKPDY AWHEGTAFQL FHLDDGCEAV CEVPATDGST IFTLQAKRTG
NTITVSGEGE ARNWTLCLRN ITQISGTKCG SYAGSELGVV VTPLGNEVVI TL