Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3953 |
Symbol | gltS |
ID | 6517147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 3824160 |
End bp | 3825365 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642748925 |
Product | sodium/glutamate symporter |
Protein accession | YP_002116688 |
Protein GI | 194733970 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0786] Na+/glutamate symporter |
TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0524542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAC TCGATACCTT ATCGACCCTT GTCGCCGCCA CGCTGGTGCT GCTACTGGGT CGCAAGCTGG TCCAGTCTGT CTCCTTACTG AAGAAATATA CGATTCCGGA GCCGGTGGCG GGGGGGTTAC TGGTCGCGGT TGCGCTGCTG GTGCTGAAAA AAAGCGTCGG TTGGGAGGTC AACTTTGATA TGACCCTGCG CGATCCGTTG ATGCTGGCGT TTTTCGCGAC GATCGGCCTT AACGCTAACC TTGCCAGCCT GCGCAAGGGG GGACGCGTTG TTGGCGTCTT CCTGGTCGTC GTGGTCGGAT TACTGCTGAT GCAGAATGCC ATCGGTATCG GCATGGCGAG TCTGTTGGGG CTGGACCCGT TAATGGGGCT GATTGCCGGG TCAATTACGC TGTCCGGCGG ACACGGTACC GGCGCGGCGT GGAGTAAACT GTTTGTCGAA CGTTATGGTT TTGCCAATGC CACCGAAGTT GCGATGGCAT GTGCAACCTT TGGCCTGGTG CTGGGCGGGT TGATAGGCGG CCCGGTAGCG CGTTATCTGG TGAAACACTC CACCACGCCG GATGGAATGC CTGACGATCA GGCCGTGCCG ACAGCCTTTG AAAAGCCGGA TGTGGGCCGT ATGATCACTT CTCTGGTGCT AATCGAAACC ATCGCCCTGA TTGCTATCTG TCTGACCGTG GGCAAAATCG TAGCGCAGCT ACTGGCGGGA ACGGTGCTTG AACTGCCGGT CTTCGTTTGT GTGCTATTTG TTGGGGTGAT CCTCAGCAAT GGCCTGGCGC TGGTGGGTTT TTATCGCGTA TTTGAGCGTG CTGTTTCGGT GCTGGGGAAC GTGAGTCTGT CACTGTTCCT GGCAATGGCG CTGATGAGCC TGAAGCTGTG GGAACTGGCG TCGCTGGCGC TGCCGATGCT GGCGATTCTG GTGGTACAGA CCATCTTCAT GGCGCTGTAC GCGATCTTCG TCACCTGGCG CATGATGGGG AAAAACTACG ATGCAGCGGT GTTGGCGGCG GGTCACTGCG GTTTTGGCCT GGGCGCAACG CCGACCGCCA TTGCTAATAT GCAGGCGATT ACCGACCGTT TTGGCCCCTC GCATATGGCG TTCCTGGTGG TGCCGATGGT TGGTGCGTTC TTTATCGATA TCGTTAATGC GTTGGTAATC AAGCTGTACC TGCTGTTACC GATTTTCGCG CAATAA
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Protein sequence | MFELDTLSTL VAATLVLLLG RKLVQSVSLL KKYTIPEPVA GGLLVAVALL VLKKSVGWEV NFDMTLRDPL MLAFFATIGL NANLASLRKG GRVVGVFLVV VVGLLLMQNA IGIGMASLLG LDPLMGLIAG SITLSGGHGT GAAWSKLFVE RYGFANATEV AMACATFGLV LGGLIGGPVA RYLVKHSTTP DGMPDDQAVP TAFEKPDVGR MITSLVLIET IALIAICLTV GKIVAQLLAG TVLELPVFVC VLFVGVILSN GLALVGFYRV FERAVSVLGN VSLSLFLAMA LMSLKLWELA SLALPMLAIL VVQTIFMALY AIFVTWRMMG KNYDAAVLAA GHCGFGLGAT PTAIANMQAI TDRFGPSHMA FLVVPMVGAF FIDIVNALVI KLYLLLPIFA Q
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