Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3950 |
Symbol | |
ID | 6519321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 3819232 |
End bp | 3821343 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642748922 |
Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
Protein accession | YP_002116685 |
Protein GI | 194736380 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0196758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATCTGT TTGAAAGCCT GAATCAACTG ATTCAAACCT ACCTGCCGGA AGACCAGATT AAGCGTCTTC GGCAGGCGTA TCTCGTTGCA CGTGACGCTC ACGAGGGCCA GACACGTTCA AGCGGTGAAC CCTATATCAC GCACCCGGTA GCGGTGGCCT GTATTCTGGC CGAGATGAAA CTCGACTACG AAACGCTGAT GGCCGCTCTG CTGCATGACG TGATTGAAGA TACCCCCGCC ACCTATCAGG ACATGGAACA GCTTTTCGGT AAAAGCGTTG CCGAGCTGGT AGAGGGGGTA TCGAAACTTG ATAAGCTCAA GTTCCGCGAT AAGAAAGAGG CGCAGGCCGA AAACTTCCGC AAAATGATTA TGGCGATGGT GCAGGATATC CGCGTCATCC TCATTAAGCT TGCTGACCGT ACCCATAACA TGCGCACGCT GGGCTCGTTA CGCCCGGACA AACGTCGCCG CATCGCCCGT GAAACCCTCG AAATTTACAG CCCGCTGGCA CACCGTTTAG GTATCCATCA CATCAAGACC GAGCTTGAAG AGCTGGGTTT TGAAGCGCTG TATCCTAACC GCTACCGCGT CATCAAAGAA GTGGTAAAAG CGGCGCGCGG CAACCGTAAA GAGATGATCC AAAAAATCCT CTCTGAAATC GAAGGACGTT TGCAAGAGGC GGGCATTCCG TGTCGCGTTA GCGGTCGCGA AAAACATCTT TACTCGATCT ACTGCAAAAT GGTGCTCAAA GAGCAGCGTT TTCACTCGAT CATGGACATT TACGCTTTCC GCGTCATCGT TCATGACTCC GATACCTGCT ATCGCGTACT CGGCCAGATG CACAGTCTCT ATAAGCCTCG TCCGGGACGG GTGAAAGACT ATATTGCCAT TCCCAAAGCG AACGGCTATC AGTCTTTGCA CACCTCGATG ATCGGCCCGC ACGGCGTTCC TGTTGAAGTC CAGATCCGTA CCGAAGATAT GGATCAGATG GCGGAAATGG GGGTCGCGGC GCACTGGGCG TATAAAGAAC ACGGTGAGAC CAGCACCACG GCGCAGATCC GCGCCCAGCG CTGGATGCAG AGCCTGCTGG AGCTACAACA GAGCGCCGGT AGTTCGTTTG AATTTATCGA AAGCGTAAAA TCCGATCTCT TCCCGGATGA GATTTACGTT TTCACCCCGG AAGGACGCAT TGTCGAACTG CCCGCTGGCG CTACGCCGGT GGACTTCGCC TACGCCGTGC ATACCGATAT CGGCCACGCC TGCGTCGGCG CGCGTGTCGA CCGGCAGCCT TATCCGCTGT CGCAGCCGCT TAGCAGCGGT CAGACCGTCG AAATTATTAC CGCGCCGGGC GCGCGTCCCA ACGCCGCCTG GCTGAACTTT GTCGTCAGCT CTAAAGCGCG CGCTAAAATT CGTCAGTTGC TGAAAAACCT CAAACGTGAT GACTCCGTAA GCCTGGGCCG TCGTCTGCTT AACCATGCTT TAGGCGGTAG TCGTAAGCTG GCGGAAATTC CGCAGGAAAA TATTCAGCGC GAATTGGATC GTATGAAGCT GGCAACGCTT GACGATCTGC TGGCGGAAAT CGGTCTCGGC AACGCGATGA GCGTAGTGGT CGCGAAAAAT CTGCAGCAAG GCGAAGCCGT GGTGCCGACC GTTGCGCAAT CGAATCACGG CCACCTGCCG ATTAAAGGCG CGGATGGCGT GCTTATCACC TTTGCGAAGT GTTGTCGTCC GATCCCAGGC GACCCGATCA TCGCTCACGT CAGCCCAGGT AAAGGACTGG TGATCCACCA TGAATCCTGC CGTAATATCC GTGGATACCA GAAAGAGCCA GAGAAATTTA TGGCGGTCGA ATGGGACAAA GAGACGGAGC AGGAATTCAT TACCGAAATC AAGGTGGAAA TGTTTAACCA TCAGGGCGCG CTGGCTAACC TGACGGCGGC GATTAATACC ACCACCTCCA ATATTCAAAG CCTGAATACT GAAGAGAAAG ATGGTCGCGT CTATAGTACC TTTATTCGCC TTACCGCACG CGATCGCGTA CATCTGGCGA ATATCATGCG CAAAATCCGC GTGATGCCAG ACGTTATTAA AGTCACCCGT AACCGAAACT AG
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Protein sequence | MYLFESLNQL IQTYLPEDQI KRLRQAYLVA RDAHEGQTRS SGEPYITHPV AVACILAEMK LDYETLMAAL LHDVIEDTPA TYQDMEQLFG KSVAELVEGV SKLDKLKFRD KKEAQAENFR KMIMAMVQDI RVILIKLADR THNMRTLGSL RPDKRRRIAR ETLEIYSPLA HRLGIHHIKT ELEELGFEAL YPNRYRVIKE VVKAARGNRK EMIQKILSEI EGRLQEAGIP CRVSGREKHL YSIYCKMVLK EQRFHSIMDI YAFRVIVHDS DTCYRVLGQM HSLYKPRPGR VKDYIAIPKA NGYQSLHTSM IGPHGVPVEV QIRTEDMDQM AEMGVAAHWA YKEHGETSTT AQIRAQRWMQ SLLELQQSAG SSFEFIESVK SDLFPDEIYV FTPEGRIVEL PAGATPVDFA YAVHTDIGHA CVGARVDRQP YPLSQPLSSG QTVEIITAPG ARPNAAWLNF VVSSKARAKI RQLLKNLKRD DSVSLGRRLL NHALGGSRKL AEIPQENIQR ELDRMKLATL DDLLAEIGLG NAMSVVVAKN LQQGEAVVPT VAQSNHGHLP IKGADGVLIT FAKCCRPIPG DPIIAHVSPG KGLVIHHESC RNIRGYQKEP EKFMAVEWDK ETEQEFITEI KVEMFNHQGA LANLTAAINT TTSNIQSLNT EEKDGRVYST FIRLTARDRV HLANIMRKIR VMPDVIKVTR NRN
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