Gene SeSA_A3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3946 
Symbol 
ID6519856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3815704 
End bp3816321 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content51% 
IMG OID642748918 
Productinner membrane protein YicG 
Protein accessionYP_002116681 
Protein GI194734449 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.000186378 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGTTGC ACGTTCTTTA TTTAATTGGC ATTACTGCCG AGGCCATGAC GGGCGCACTC 
GCTGCGGGTC GTCGTCGCAT GGATACATTC GGTGTAATTA TTATTGCTAC CGCCACCGCC 
ATTGGTGGAG GCTCGGTTCG CGACATTCTG CTCGGTCACT ATCCGCTGGG TTGGGTGAAG 
CATCCCGAAT ATGTCATTAT TGTGGCGACT GCCGCTGTAT TGACCACCAT TGTTGCCCCC 
GTCATGCCCT ATTTACGCAA GCTTTTCCTG GTACTTGACG CGCTGGGGTT GGTGGTTTTC 
TCTATTATTG GCGCTCAGAT AGCCCTTGAT ATGGGCGAAG GGCCAATTAT CGCCGTGGTA 
GCCGCCGTCA CTACCGGCGT CTTTGGCGGC GTACTCCGCG ATATGTTCTG CAAACGCATT 
CCACTGGTGT TTCAAAAAGA GCTATATGCC GGCATTTCGT TCGCCTCGGC GGTGCTCTAT 
ATTGCGCTAC AACATTACGT CATGAATCCG GATGTCGTCG TTATCTCTAC GTTACTGTTT 
GGCTTTACAG CAAGGTTATT AGCGCTACGT CTTAAACTTG GCCTGCCGGT ATTTTATTAC 
CGCCATGAAG GGCACTAA
 
Protein sequence
MLLHVLYLIG ITAEAMTGAL AAGRRRMDTF GVIIIATATA IGGGSVRDIL LGHYPLGWVK 
HPEYVIIVAT AAVLTTIVAP VMPYLRKLFL VLDALGLVVF SIIGAQIALD MGEGPIIAVV 
AAVTTGVFGG VLRDMFCKRI PLVFQKELYA GISFASAVLY IALQHYVMNP DVVVISTLLF 
GFTARLLALR LKLGLPVFYY RHEGH