Gene SeSA_A3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3944 
Symbol 
ID6516499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3814572 
End bp3815453 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content52% 
IMG OID642748916 
Productbeta-lactamase 
Protein accessionYP_002116679 
Protein GI194736864 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.896409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.000201992 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCGCT ATGCATTATT CTTTGTATGT ATATTTTCAA CATCAGCACT TCCTGCCATG 
GCGGCATTAG ATCCTTCACA ACCGTTATCA CCCGCGCCTC CGTTATCACT GTTTAAAGCG 
TGGGCTAAGC CTATGAAGCC GTTTCAAATC ACAGAAGGCG TGTGGTATGT CGGCACGGAA 
AATCTCTCTT CTATTCTGCT GACCACCCCG GCAGGGCATA TTCTTATTGA TGCGGGATTG 
GATGAAAGCG CACCGCAAAT TAAAGCGAAT ATTGAAGCGG CAGGATTCCG CCTCACAGAC 
ATACGCTATC TATTGAACAG CCATGCGCGG CTGGATCAAG CGGGGGGCAT GGCACGTTTG 
AAAGCGTGGA GCGGCGCACA ATTGGTCGCC AGCCAACCCA ACGCCGATCA GATGGCGAGG 
GGTGGACGAG AGGATTTTGC GCTTGGCGAT GCGCTCCCCT TCCCGCCCGT CACCACTGAT 
AAAATTATCC ACAACCAGGA AAGCATCAGC CTCGGAGGGA TAACCGTGAC AGCACTATTC 
ACGCCCGGAC ATCTGCCCGG CTCAACTTCC TGGCGCGTAA CGCTCCGCAA CGGCAAGACG 
CTAATTTACG CAGATAGTCT CGCCACGCCC GACTATCTGC TGATTAACAA CAAAAACTAC 
CCTGACCTGG TTACTGATAT TCAGAGTAGC TTTAAGACAC TGGCCGCCCA GCATGTTGAT 
ATCTTTATTG CCAACAAAGG TGACCGCTTC GGGCTACTGG AGAAACGACA GCAACTTCGC 
AACGGCGATA CACAGGCATT CTTTGATTCC AATGGCTTGC AACAGTATGT GGAACGCTCA 
CGTCAGCGCT TCATCACACA ACTTACCGCA CAGCAGCCAT AA
 
Protein sequence
MNRYALFFVC IFSTSALPAM AALDPSQPLS PAPPLSLFKA WAKPMKPFQI TEGVWYVGTE 
NLSSILLTTP AGHILIDAGL DESAPQIKAN IEAAGFRLTD IRYLLNSHAR LDQAGGMARL 
KAWSGAQLVA SQPNADQMAR GGREDFALGD ALPFPPVTTD KIIHNQESIS LGGITVTALF 
TPGHLPGSTS WRVTLRNGKT LIYADSLATP DYLLINNKNY PDLVTDIQSS FKTLAAQHVD 
IFIANKGDRF GLLEKRQQLR NGDTQAFFDS NGLQQYVERS RQRFITQLTA QQP