Gene SeSA_A3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3939 
Symbol 
ID6519878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3809083 
End bp3809916 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content31% 
IMG OID642748911 
Producthypothetical protein 
Protein accessionYP_002116674 
Protein GI194737742 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.698745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.0000139678 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTAAATA TCATAAACAA AAAATCTTTA TTTATTCTTT CAATGATGGC TTGCAGTACA 
AGTTATGCTG CTTCTTTTGA TTGTAATACA GTAGCTTCAG GTGTTGAAAA AATGATTTGC 
TCAGATCATA AGTTAAGTCG TTTGGACGAC TATCTATCCC AGAACTATAA AATAGCTATG 
GGGCCTGATA TGCCTGAAGA AGCAAAATCT AAAATTAGAA AATCGCAAAT AGATTGGCTT 
AATAAGAGAA ATGCTTGTAC TGATGCTCAA TGCATTGAAC GAATGTATTC TAAGCAGATG 
GATTATCTTT GGAACGAATG CTTTGATCAT CTTAGTGGCA AAATTGAATA TATTAAATTT 
TCCGAAGCAA TAGATAAGAT AAAGAGAGAT CTAGCTTCTC AAGAATATAA TAAAACTCAT 
AAGACACCTG AGGAAGTTAT CAGGGAATTA TCAACTAAGA ACACTAACAA AGTCCAACAA 
TTAGGATTTA ATAATAAACA GTTAGATTCA ATTTTATTTT TAGATGGGTT TGGTAGTTAC 
TTTGAATATC ATACATTAAG AGAGAGTCTG TCATTGATTT ATGAACTTCC AGATTTAACA 
TCATTAGAGA TGATCAATTA TAAAGGTTAT GCTGGATTTA AAATAAAAAC AACAGGGAGA 
CCTTCTTCTG GGTTTATTTT TAGAGAAGAA AATGGTGAGA TTTATTTAAA TGGTCTCGTA 
TCTGGCGATA AAGTTATTGA GGCTACTACT GAAAATGACA TGCGAGAGTT AGCTCGTATT 
TTTTTGAGCT ATACAGGTTA TGTTATTGAC AATAATAACT CCAAAGATTT ATGA
 
Protein sequence
MVNIINKKSL FILSMMACST SYAASFDCNT VASGVEKMIC SDHKLSRLDD YLSQNYKIAM 
GPDMPEEAKS KIRKSQIDWL NKRNACTDAQ CIERMYSKQM DYLWNECFDH LSGKIEYIKF 
SEAIDKIKRD LASQEYNKTH KTPEEVIREL STKNTNKVQQ LGFNNKQLDS ILFLDGFGSY 
FEYHTLRESL SLIYELPDLT SLEMINYKGY AGFKIKTTGR PSSGFIFREE NGEIYLNGLV 
SGDKVIEATT ENDMRELARI FLSYTGYVID NNNSKDL