Gene SeSA_A3921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3921 
Symbol 
ID6518301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3792824 
End bp3793948 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content49% 
IMG OID642748894 
Productlipopolysaccharide core biosynthesis protein RfaG 
Protein accessionYP_002116657 
Protein GI194737226 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.149392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.00193824 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAGTTG CCTTTTGCTT ATATAAATAT TTTCCTTTTG GCGGTCTGCA GCGTGATTTT 
ATGCGCATTG CCCAAACCGT GGCGGCGCGA GGGCATCAGG TTCGTGTTTA TACTCAGTCA 
TGGGAAGGGG AATGCCCGGA TAACTTTGAA TTAATCCGCG TGCCGGTTAA ATCCCGGACG 
AACCACGGTC GTAACGCAGA ATATTATGCC TGGGTGCAAC ACCATTTGCG CGACCACCCT 
GTCGATCGGG TGGTTGGATT CAATAAGATG CCGGGCCTTG ATGTGTATTA CGCCGCAGAC 
GTGTGTTACG CCGAAAAAGT CGCACAGGAA AAAGGATTTT TCTATCGCCT GACATCACGC 
TATCGGCATT ATGCTGCTTT TGAACGCGCC ACGTTTGAAC ACGGCAAGCC GACGCAACTA 
TTAATGCTGA CGAATAAGCA GATTGCTGAC TTCCAAAAAC ATTATCAGAC TGAAGCGGAG 
CGTTTCCATA TTCTTCCTCC GGGGATTTAC CCGGACAGAA AATATAGCCA ACAGATCCCA 
AACAGTCGTC AAATTTATCG TCAGAAAAAT GGTATCTCAG AACAGCAAAA ATTACTGTTG 
CAAGTAGGGT CTGACTTTAC CCGTAAAGGT GTGGATCGCT CTATTGAAGC GCTGGCATCG 
CTACCCGAAT CTTTACGGCA AAATACGGTG CTCTATGTTG TTGGGCAGGA TAAGCCGAAG 
AAGTTTGCAG CGCTGGCTGA AAGAAGCGGC GTCGGCACGA ATGTGCATTT TTTCTCCGGA 
CGTAATGATA TCGCGGAGTT AATGGCGGCA GCCGACCTTT TACTGCATCC AGCCTATCAG 
GAAGCTGCTG GTATTGTTTT GCTGGAAGCC ATTACTGCTG GTTTGCCGGT GCTGACAACC 
GCGGTGTGCG GTTATGCACA TTATATTGTG GATGCAAACT GTGGCGAAGC GATGACTGAA 
CCATTCCGCC AGGATGCGCT AAATGAGGTT TTACTCAAAG CGCTGACACA GCCTTCCTTA 
CGCAGCGCCT GGGCTGAAAA TGCGCGGTAT TATGCTGATA CCCAGGATTT ATACAGCTTA 
CCGGAGAAGG CCGCAGATAT TATTACAGGT GATTTAGATG GTTGA
 
Protein sequence
MRVAFCLYKY FPFGGLQRDF MRIAQTVAAR GHQVRVYTQS WEGECPDNFE LIRVPVKSRT 
NHGRNAEYYA WVQHHLRDHP VDRVVGFNKM PGLDVYYAAD VCYAEKVAQE KGFFYRLTSR 
YRHYAAFERA TFEHGKPTQL LMLTNKQIAD FQKHYQTEAE RFHILPPGIY PDRKYSQQIP 
NSRQIYRQKN GISEQQKLLL QVGSDFTRKG VDRSIEALAS LPESLRQNTV LYVVGQDKPK 
KFAALAERSG VGTNVHFFSG RNDIAELMAA ADLLLHPAYQ EAAGIVLLEA ITAGLPVLTT 
AVCGYAHYIV DANCGEAMTE PFRQDALNEV LLKALTQPSL RSAWAENARY YADTQDLYSL 
PEKAADIITG DLDG