Gene SeSA_A3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3916 
Symbol 
ID6516849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3787841 
End bp3788854 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content34% 
IMG OID642748889 
Productlipopolysaccharide 1,2-glucosyltransferase 
Protein accessionYP_002116652 
Protein GI194734939 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.620452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.010871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAT TTCCTGAGAT AGAAATAGCT GAATATAAAG TTTTTGATGA AAGTAATAAT 
AATAATGATG ATAACGTATT AAACATTTCT TATGGTGTTG ATGAAAACTA TCTTGATGGT
GTGGGGGTAT CAATTGCTTC AGTTGTATTA AATAATAATA TCCCGCTCGC TTTCCATATT
ATTTGTGATT CATACTCCTC GTGTTTTGTA AAATATATAG AGCGTTTAGC CGTACAGCAT
CACATAAAAA TTTCTCTTTA TCTTATTAAA GTAGAAAGCC TTGAGGTATT GCCTCAAACT
AAAGTATGGT CGAGAGCAAT GTATTTTCGT TTATTTGCTT TCGATTATCT CAGCAAGAAG
GTAAACACAT TACTTTATTT GGATGCCGAT GTTGTATGCA AAGGATCTTT GCAAGATCTT
TTACAGCTTG ATCTGACAGA GAAGATCGCT GCGGTCGTAA AAGATGTTGA TTCCATCCAG
AATAAGGTAA ATGAGAGATT AAGAGCATTT AATTTACAAG GTGGTTATTT TAACTCCGGC
GTGGTTTTTG TTAACCTGAA ATTATGGAAA GAGAATGCCT TAACTGAAAA GGCATTTTTA
CTTCTGGCAG GTAAAGAGGC TGACTCTTTT AAATATCCCG ATCAGGATGT TTTGAATATT
CTCCTACAGG ATAAAGTCAT TTTTCTTCCG CGACCGTATA ATACCATTTA TACTATCAAA
AGTGAGTTGA AAGATAAGTC ACATAAAAAA TATAGCAATA TAATTAATGA TAATACTATT
TTAATTCATT ATACGGGCGC TACAAAACCA TGGCATGCCT GGGCAAATTA TCCTTCAGTT
ATCTATTATA AAAATGCACG ACTGAATTCG CCCTGGAAAG ATTTTCCCGC AAAAGATGCG
CGTACCATAG TTGAATTTAA GAAGCGATAT AAACATCTTC TCGTGCAAGG TCATTACTTT
AAAGGCCTTC TGGCTGGAAG CGCATATCTT TATCGTAAAA TTTTCCACAA ATAA
 
Protein sequence
MDSFPEIEIA EYKVFDESNN NNDDNVLNIS YGVDENYLDG VGVSIASVVL NNNIPLAFHI 
ICDSYSSCFV KYIERLAVQH HIKISLYLIK VESLEVLPQT KVWSRAMYFR LFAFDYLSKK
VNTLLYLDAD VVCKGSLQDL LQLDLTEKIA AVVKDVDSIQ NKVNERLRAF NLQGGYFNSG
VVFVNLKLWK ENALTEKAFL LLAGKEADSF KYPDQDVLNI LLQDKVIFLP RPYNTIYTIK
SELKDKSHKK YSNIINDNTI LIHYTGATKP WHAWANYPSV IYYKNARLNS PWKDFPAKDA
RTIVEFKKRY KHLLVQGHYF KGLLAGSAYL YRKIFHK