Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3916 |
Symbol | |
ID | 6516849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 3787841 |
End bp | 3788854 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642748889 |
Product | lipopolysaccharide 1,2-glucosyltransferase |
Protein accession | YP_002116652 |
Protein GI | 194734939 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.620452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.010871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCAT TTCCTGAGAT AGAAATAGCT GAATATAAAG TTTTTGATGA AAGTAATAAT AATAATGATG ATAACGTATT AAACATTTCT TATGGTGTTG ATGAAAACTA TCTTGATGGT GTGGGGGTAT CAATTGCTTC AGTTGTATTA AATAATAATA TCCCGCTCGC TTTCCATATT ATTTGTGATT CATACTCCTC GTGTTTTGTA AAATATATAG AGCGTTTAGC CGTACAGCAT CACATAAAAA TTTCTCTTTA TCTTATTAAA GTAGAAAGCC TTGAGGTATT GCCTCAAACT AAAGTATGGT CGAGAGCAAT GTATTTTCGT TTATTTGCTT TCGATTATCT CAGCAAGAAG GTAAACACAT TACTTTATTT GGATGCCGAT GTTGTATGCA AAGGATCTTT GCAAGATCTT TTACAGCTTG ATCTGACAGA GAAGATCGCT GCGGTCGTAA AAGATGTTGA TTCCATCCAG AATAAGGTAA ATGAGAGATT AAGAGCATTT AATTTACAAG GTGGTTATTT TAACTCCGGC GTGGTTTTTG TTAACCTGAA ATTATGGAAA GAGAATGCCT TAACTGAAAA GGCATTTTTA CTTCTGGCAG GTAAAGAGGC TGACTCTTTT AAATATCCCG ATCAGGATGT TTTGAATATT CTCCTACAGG ATAAAGTCAT TTTTCTTCCG CGACCGTATA ATACCATTTA TACTATCAAA AGTGAGTTGA AAGATAAGTC ACATAAAAAA TATAGCAATA TAATTAATGA TAATACTATT TTAATTCATT ATACGGGCGC TACAAAACCA TGGCATGCCT GGGCAAATTA TCCTTCAGTT ATCTATTATA AAAATGCACG ACTGAATTCG CCCTGGAAAG ATTTTCCCGC AAAAGATGCG CGTACCATAG TTGAATTTAA GAAGCGATAT AAACATCTTC TCGTGCAAGG TCATTACTTT AAAGGCCTTC TGGCTGGAAG CGCATATCTT TATCGTAAAA TTTTCCACAA ATAA
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Protein sequence | MDSFPEIEIA EYKVFDESNN NNDDNVLNIS YGVDENYLDG VGVSIASVVL NNNIPLAFHI ICDSYSSCFV KYIERLAVQH HIKISLYLIK VESLEVLPQT KVWSRAMYFR LFAFDYLSKK VNTLLYLDAD VVCKGSLQDL LQLDLTEKIA AVVKDVDSIQ NKVNERLRAF NLQGGYFNSG VVFVNLKLWK ENALTEKAFL LLAGKEADSF KYPDQDVLNI LLQDKVIFLP RPYNTIYTIK SELKDKSHKK YSNIINDNTI LIHYTGATKP WHAWANYPSV IYYKNARLNS PWKDFPAKDA RTIVEFKKRY KHLLVQGHYF KGLLAGSAYL YRKIFHK
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